Table 3. Summary of variants within the 1.44 Mb critical interval on canine chromosome 27.

Variant Type	Number of Variants
Total SNP and Indel variants in 1.44 Mb	14167
Variants that segregate across 7 NSDTR genomes	582
Variants that segregate across all 33 dog genomes	142

Based on alignments to CanFam 3.1 Boxer reference sequence. Only variants that are homozygous in all cases and not homozygous in any controls were considered to segregate and could be excluded. Variants were filtered against a reference set of 26 control dogs with whole genome sequencing data.