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. Author manuscript; available in PMC: 2015 Mar 24.
Published in final edited form as: J Natl Compr Canc Netw. 2015 Mar;13(3):311–318. doi: 10.6004/jnccn.2015.0043

Table 2. Clinical Expert Perspectives: Categories of Sequencing Targets Included in Next-Generation Tumor Sequencing Panels and Corresponding Uses.

Target Categorya Description How It May Be Used Type of Use
Established targets Standard-of-care alterations: proven validity and utility for specific cancers acknowledged by guidelines and/or covered by payers Guide the use of a targeted therapy approved for specific cancer (predictive targets) Clinical
Inform prognostication (prognostic targets) Clinical
Match a patient to a biomarker-driven clinical trial of a novel drug for an established target Research

Novel targets Alterations with known or suspected, but less proven validity and/or utility, or new alterations for known tumor suppressor genes with existing targeted therapies Guide the use of targeted therapy if available for established variant of same gene Clinical or research
Match patients to biomarker-driven clinical trials, if available Research
Inform genomic and drug discovery Research

Pan-cancer targets Alterations with established validity and utility in another cancer Guide the use of an approved targeted therapy based on the target/drug model from another cancer Clinical or research

All of the above Enhanced understanding of a patient's tumor Assess tumor heterogeneity Clinical or research
Determine tumor pathways (eg, resistance to therapies) Clinical or research
Assess temporal tumor behavior and evolution during treatment (via repeat monitoring) Clinical or research
a

Tumor genetic or molecular alterations and biomarkers interrogated by next-generation sequencing panels.