Table 2. Clinical Expert Perspectives: Categories of Sequencing Targets Included in Next-Generation Tumor Sequencing Panels and Corresponding Uses.
Target Categorya | Description | How It May Be Used | Type of Use |
---|---|---|---|
Established targets | Standard-of-care alterations: proven validity and utility for specific cancers acknowledged by guidelines and/or covered by payers | Guide the use of a targeted therapy approved for specific cancer (predictive targets) | Clinical |
Inform prognostication (prognostic targets) | Clinical | ||
Match a patient to a biomarker-driven clinical trial of a novel drug for an established target | Research | ||
| |||
Novel targets | Alterations with known or suspected, but less proven validity and/or utility, or new alterations for known tumor suppressor genes with existing targeted therapies | Guide the use of targeted therapy if available for established variant of same gene | Clinical or research |
Match patients to biomarker-driven clinical trials, if available | Research | ||
Inform genomic and drug discovery | Research | ||
| |||
Pan-cancer targets | Alterations with established validity and utility in another cancer | Guide the use of an approved targeted therapy based on the target/drug model from another cancer | Clinical or research |
| |||
All of the above | Enhanced understanding of a patient's tumor | Assess tumor heterogeneity | Clinical or research |
Determine tumor pathways (eg, resistance to therapies) | Clinical or research | ||
Assess temporal tumor behavior and evolution during treatment (via repeat monitoring) | Clinical or research |
Tumor genetic or molecular alterations and biomarkers interrogated by next-generation sequencing panels.