Table 1.
Pacu de novo transcriptome metrics
| Parameters | Slow skeletal muscle | Fast skeletal muscle |
|---|---|---|
| Reads | 704,550,985 | 765,658,497 |
| Reads assembled | 521,568,496 | 665,042,497 |
| Contigs | 504,065 | |
| Contig mean lenght (bp) | 1,334 | |
| N50 (bp) | 2,772 | |
| Contigs Annotated | 232,637 | |
| Unique genes | 15,000 | |
| Paralogues | 406 | |
| Differentially expressed genes | 3,473 | 2,458 |
| Annotated Pathway | 314 | |
N50: The value was computed by sorting all contigs from largest to smallest and by determining the minimum set of contigs whose sizes total 50% of the entire transcriptome.