Table 4.
Gene | Primers | Sequence to analyze | PCR product size (bp) | |
---|---|---|---|---|
PRM_1 | F | 5′-GGG GTG GTT AGG GAT ATG T-3′ | ATTTYGTGYGAGYGTTYGTTTAGGTTTTTTAYGYGGTATYGGATTATGGTGTTGGGAGATTTGGTGG | 335 |
R | Bio5′-CAC CAA ATC TCC CAA CAC CAT-3′ | |||
S | 5′-ATG TAA TTG TTG TTT GTA T-3′ | |||
PRM_2 | F | Bio5′-GGG GTG GTT AGG GAT ATG T-3′ | ACCRAATCCACAAACRACAACATCRCTCCTACAAAAAACRCAAAAAACRCTCCTACAAACACC | 182 |
R | 5′-AAA AAC CCA TAA CCA ATC TCA CTA TAA-3′ | |||
S | 5′-CAC TAC TCT CCA AAA AAA CTA C-3′ | |||
AFF4 | F | 5′-GGG TTA GGG TTG GGA TAG TTG A-3′ | TTYGTTTYGTTYGTTGGYGGYGGYGAYGGTAGTTGGATTTTTGTAGTTAGGGT | 229 |
R | Bio5′-AAA CCC CCC CCC CCT ACT-3′ | |||
S | 5′-GAA GAT TTG GTA TTA GGA TT-3′ | |||
H19_4 | F | 5′-GGGGGTTTTTGTATAGTATATGGGT-3′ | AATYGGAAGTGGTYGYGYGGYGGTAGTGTAGGTTTATATATTATAGTT | 242 |
R | Bio5′-ACTCCTATAAATATCCTATTCCCAAAT-3′ | |||
S | 5′-GGAATTGGTTGTAGTTGTGG-3′ | |||
NSD1m1 | F | 5′-AGTTGAGGATTTAGTAGGTTTGTATTTAG-3′ | GTGTAGTYGTTTYGGTYGGTTYGTTTGYGGTTTGYGTATYGTYGTTGTAAAGGTTT | 173 |
R | Bio5′-TACCCCCCCCTTCCTAACT-3′ | |||
S | 5′-GGAAGGAGAGTTTTGGG-3′ |
Table shows sequence to analyze and size of the PCR amplicons. F: forward primer; R: reverse primer; S: sequencing primer; Bio: biotinylation.