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. 2015 Mar 24;35(8):1433–1448. doi: 10.1128/MCB.01328-14

TABLE 1.

ChIP-seq data alignment information

ChIP No. of reads
% aligned % uniquea % genome coverage
Total Aligned Unique
Input 54,990,464 35,623,672 32,940,684 64.78 92.47 90.64
H3 71,828,757 37,798,741 30,151,960 52.62 79.77 82.96
H3K9me3 84,339,867 39,799,707 27,591,619 47.19 69.33 75.92
H3K9ac 67,856,707 48,595,679 34,042,406 71.62 70.05 93.67
H4K5ac 66,596,815 46,239,262 34,065,138 69.43 73.67 93.73
H4K8ac 79,795,471 48,838,021 29,541,448 61.20 60.49 81.28
H4K12ac 71,252,246 46,341,541 33,485,169 65.04 72.26 92.14
H4K16ac 77,287,145 49,326,598 28,973,938 63.82 58.74 79.72
H4ac 70,049,830 48,662,721 32,799,658 69.47 67.40 90.25
BRD4 84,730,635 47,671,985 24,864,246 56.26 52.16 68.41
a

Total aligned reads compared to uniquely mapped reads for each ChIP-seq sample.