Table 3. Oligonucleotide probes used in this study for FISH analysis.
Probe | Target group | Reference |
---|---|---|
EUB338a | Most bacteria | [22] |
EUB338IIa | Most bacteria | [22] |
EUB338IIIa | Most bacteria | [22] |
Bac303 | Bacteroides spp. | [23] |
Bif164 | Bifidobacterium spp. | [23] |
Lab158 | Lactobacillus-Enterococcus spp. | [24] |
Erec482 | Most of the Clostridium coccoides-Eubacterium rectale group (Clostridium cluster XIVa and XIVb) | [25] |
Chis150 | Clostridium histolyticum group | [26] |
Prop853 | Clostridium cluster IX | [27] |
Rrec 5842 | Roseburia subcluster | [28] |
Fprau655 | Faecalibacterium prausnitzii and related sequences | [28] |
a, bThese probes are used together in equimolar concentrations