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. Author manuscript; available in PMC: 2015 Nov 1.
Published in final edited form as: Expert Rev Mol Diagn. 2014 Aug 28;14(8):999–1021. doi: 10.1586/14737159.2014.946907

Table 1. A comprehensive list of dysregulated miRNAs in primary colorectal cancer tissues.

miRNA Target gene Chromosomal location Reference
Up-regulated miRNA
miR-16 BMI1, WIP1, CDK6 13q14.2/3q25.33 [151,152]
miR-17 PTEN, DLC1, ZBP1, p130 13q 31.3 [47,84,153,154]
miR-18a Dicer1, KRAS, PTEN, CTGF, ATM 13q 31.3 [155,156]
miR-20a PTEN, RUNX1,E2F1,HIF1A 13q 31.3 [25,47,84,153,157]
miR-21 PTEN, PDCD, RECK, JAG1, BCL2, TIMP3, DKK2 17q 23.1 [31,49,84,158-160]
miR-29a KLF4, DNMT3a, DNMT3b 7q 32.3 [153,161,162]
miR-31 FIH1, RhoBTB1, RASA1 9q 21.3 [49,153,163-165]
miR-32 PTEN 9q 31.3 [19,166-168]
miR-33 Pim1, p53, HMGA2 22q 13.2 [19,168]
miR-92a PTEN, P63, RECK, DUSP10, ITGA5 13q 31.3/Xq 26.2 [31,47,84,153,169,170]
miR-95 SNX1, SGPP1 4p16.1 [31,47,153,162,171]
miR-96 FOXO1, RECK, RAD51, REV1 7q 32.2 [25,47,162,168,172,173]
miR-106a PTEN, TIMP2, PDCD4, p130, RUNX3 Xq 26.2 [19,31,47,162]
miR-106b APC, RBL1, RBL2, CASP8 7q 22.1 [47,84,162]
miR-130b PPARγ, ITGB1, PTEN 22q 11.21 [162,174-176]
miR-135a APC, MCL1, c-MYC, HOXA10 3q 21.1 [31,34]
miR-135b APC, MTSS1, LATS2, β-TrCP, LZTS1 1q 32.1 [25,34,47,173]
miR-155 MLH1, MSH2, MSH6, APC, TP53, INP1 21q 21.3 [177,178]
miR-181b CBX7, CYLD, AC9 9q 33.3 [31,84,162,179,180]
miR-182 NDRG1, RECK, MTSS1, SMAD4 7q 32.2 [153,168,181,182]
miR-183 IDH2, PDCD4, Dkk3, SMAD4 7q 32.2 [25,84,153,168,183]
miR-191 TIMP3 3p 21.31 [19,180,184]
miR-196b HOXC8, HOXB7 7p 15.2 [153,185]
miR-200c ZEB1, ZEB2, BMI1 12p 13.31 [177,180]
miR-203 ZEB2, BMI1, SOCS3, VEGFA 14q 32.33 [31,84,162,186]
miR-223 E2F1, FOXO1, EPB41L3 Xq 12 [31,47,84,186,187]
miR-224 SMAD4, CXR4, PHLPP1, PHLPP2 Xq 23 [47,153,162,168,188]
miR-335 RB1, ROCK1 7q 32.2 [31,86,185]
miR-493 IGF1R 14q 32.2 [153,173]
miR-584 ROCK1 5q 32 [168,173,187]
Down-regulated miRNA
let-7a KRAS, NRAS 9q22.32/11q24.1/22q13.31 [186,187]
miR-1 BDNF, MET, SLUG, CCND2, SDF1 18q 11.2/20q 13.33 [31,50,162,168,173,187,189]
miR-7 YY1, XRCC2 9q 21.32 [190,191]
miR-9 CXCR4, BRCA1, TLN1, ITGB1 1q22/5q14.3/15q26.1 [168,192]
miR-30a DTL, HIF2α 6q 13 [25,31,162,168]
miR-30b SIX, KRAS,PIK3D, BCL21 8q 24.22 [187,193,194]
miR-30c BCL9, SNAI1 1q 34.2/6q 13 [162,187]
miR-34b/c BTG4, MET, CDK4, CDK6, RUNX2 11q 23.1/ [31,195,196]
miR-101 EZH2, COX2, TET2 9q 24.1 [26,187,197]
miR-124a SLUG, STAT3, EZH2, IL6R 8p23.1/8q12.3/20q13.33 [25,198,199]
miR-126 CXCR4, IRS-1, VEGF 9q34.3 [200-204]
miR-129 BCL2, CDK6, SOX4 7q32.1/11p11.2 [25,109]
miR-133a LASP1, RFFL, FSCN1 18q 11.2/20q 13.33 [50,115,162,168,205]
miR-133b CXCR4, MET 6p12.2 [25,189,206]
miR-137 LSD1, FMNL2, CDC42, CDK6 1p 21.3 [168,207]
miR-139 IGF1R, NR5A2 11q 13.4 [162,168,173,208]
miR-143 KRAS, DNMT3A, TLR2, MACC1 5q 32 [84,162,186,187,209]
miR-145 MUC1, KLF4, Fascin1, SOC2, YES1 5q 32 [25,84,162,173,187,210]
miR-148a BCL2, MMP7, ROCK1 7p 15.2 [122,187,211]
miR-192 BCL2, ZEB2, VEGFA 11q 13.1 [31,186,187,212]
miR-195 BCL2, IKKα, TAB3, E2F3 17p 13.1 [162,173,187,213,214]
miR-212 MnSOD 17p 13.3 [26,215]
miR-215 RB1 1q 41 [31,84,175,186,187,212,216]
miR-218 BMI1, CDK6, DKK2 4p 15.31/5q 34 [217,218]
miR-320a Rac1, β-catenin, NRP1 8p 21.3 [84,219,220]
miR-342 DNMT1, ID4, BMP7 14q 32.2 [31,187,221]
miR-363 GATA6, SIPR1, PDPN Xq 26.2 [168,173]
miR-375 PI3K, PDK1, AEG1, IGF1R, YAP 2q 35 [168,187,216,222,223]
miR-378 IGF1R, MYC, VEGFA 5q 32 [168,173,187,216,224]
miR-497 IGF1R, BCL2, RAF1 17p 13.1 [113,162]