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. 2015 Mar 26;6:230. doi: 10.3389/fmicb.2015.00230

Table 3.

PERMANOVAs based on BC similarity measure for square-root transformed relative abundances or Jaccard similarity measure (composition) of bacterial TRF profiles associated with Phyllospora at their destination place in (A) donor populations or (B) Sydney metro in the second experiment.

Square-root transformed BC
Jaccard
Source df MS pseudo-F p(perm.) MS pseudo-F p(perm.)
(A)
Tr 2744 1.40 0.254 3578 1.32 0.259
Pl 2929 3.20 < 0.001 3732 2.19 < 0.001
Tr × Pl 1966 2.15 0.004 2702 1.58 0.004
Residual 914 1706

Pairwise tests PB: TL ≠ U
Cr: TL ≠ U
PB: TL ≠ U
Cr: TL ≠ U

(B)

Tr 2327 2.35 0.004 3126 1.74 0.006
Pl 4288 4.33 < 0.001 4987 2.79 < 0.001
Tr × Pl 879 Pooled 1875 Pooled
Residual 997 1786

(A) Treatment was fixed with two levels (U, TL), Place of destination was random with two levels (Cr, PB). (B) Treatment was fixed with two levels (TP from Palm Beach or Cronulla), Place of destination was random with two levels (CB, LB). The replicates were the Phyllospora individuals (n = 5). P-values were calculated using 9,999 permutations under a reduced model. Non-significant interaction terms with p > 0.25 were pooled. Bold indicates statistical significance (at alpha = 0.005).