Table 1. Model validation scores of zNOD1-NACHT and zNOD2-NACHT of zebrafish.
Servers | zNOD1-NACHT | zNOD2-NACHT | |
---|---|---|---|
PROCHECK | Most favored regions (%) | 86.40 | 84.30 |
Additionally allowed Regions (%) | 9.90 | 9.40 | |
Generously allowed Regions (%) | 1.00 | 3.80 | |
Disallowed regions (%) | 2.60 | 2.40 | |
Overall G-factor | 0.18 | 0.13 | |
Verify3D | Averaged 3D-1D Score > 0.2 | 82.79 | 88.92 |
ERRAT | Overall Quality | 84.45 | 89.87 |
ProSA | Z-Score | −7.57 | −6.26 |
ProQ | LG score | 3.16 | 4.63 |
MaxSub | 0.22 | 0.45 | |
MolProbity | Cβ deviations >0.25Å (%) | 0.31 | 1.32 |
Residues with bad bonds (%) | 0.00 | 0.00 | |
Residues with bad angles (%) | 0.00 | 0.06 | |
RESPROX | Predicted resolution(Å) | 2.24 | 2.29 |
VADAR | Standard deviation of χ1 pooled | 0.64 | 1.02 |
(Z-score) | Mean H-bond energy | 0.65 | 0.65 |
Generously allowed Ω angles (%) | 0.52 | −0.26 | |
Packing defects (%) | 1.21 | 0.95 | |
Percentage of 95% buried residues | 0.54 | 0.24 | |
GeNMR | Ramachandran outside of most favored | 1.81 | 2.67 |
(Z-score) | Bump score | 0.34 | 0.34 |
Radius gyration score | 1.33 | 1.40 | |
PROSESS | Deviation of Θ angles | 0.86 | 1.07 |
(Z-score) | χ1 score | 0.42 | 0.12 |