Table 2.
Functional classification of extracted coding sequences (CDS) from the putative housekeeping class from the sialotranscriptome of adult Rhipicephalus pulchellus ticks.
| Class | CDS | Associated Reads | % Total reads |
|---|---|---|---|
| Unknown conserved | 2,243 | 4,083,858 | 22.6856 |
| Signal transduction | 2,092 | 2,452,172 | 13.6217 |
| Transcription machinery | 1,319 | 1,749,731 | 9.7197 |
| Protein synthesis machinery | 467 | 1,637,732 | 9.0975 |
| Protein export | 827 | 1,239,885 | 6.8875 |
| Transporters and channels | 721 | 1,068,327 | 5.9345 |
| Energy metabolism | 212 | 1,026,836 | 5.7040 |
| Extracellular matrix | 335 | 632,742 | 3.5148 |
| Proteasome machinery | 442 | 585,484 | 3.2523 |
| Lipid metabolism | 446 | 502,702 | 2.7925 |
| Protein modification | 266 | 500,861 | 2.7823 |
| Nuclear regulation | 424 | 415,586 | 2.3086 |
| Cytoskeletal proteins | 316 | 413,798 | 2.2986 |
| Carbohydrate metabolism | 304 | 403,332 | 2.2405 |
| Protein modification/Protease | 193 | 267,022 | 1.4833 |
| Transcription factor | 210 | 252,611 | 1.4032 |
| Amino acid metabolism | 140 | 223,972 | 1.2442 |
| Nucleotide Metabolism | 172 | 122,319 | 0.6795 |
| Nuclear export | 71 | 107,089 | 0.5949 |
| Oxidant metabolism/Detoxification | 72 | 100,617 | 0.5589 |
| Other immune related proteins | 77 | 74,336 | 0.4129 |
| Intermediary metabolism | 62 | 60,342 | 0.3352 |
| Detoxification | 77 | 59,983 | 0.3332 |
| Storage | 11 | 20,655 | 0.1147 |
| Total | 11,499 | 18,001,992 | 100 |