TABLE 1.
Vibrionaceae strains used in this study
| Species | Strain | WGS/fur GenBank accession no. |
|---|---|---|
| Strains used in the in silico studya | ||
| Aliivibrio fischeri | ZF-211 | AJYI01 |
| Aliivibrio logei | 5S-186 | AJYJ01 |
| Aliivibrio logei | ATCC 35077 | ASAH01 |
| Enterovibrio calviensis | DSM 14347T | JHZA01 |
| Enterovibrio norvegicus | FF-33 | AJYD01 |
| Grimontia hollisae | CIP 101886T | ADAQ01 |
| Grimontia sp. | AK16 | ANFM02 |
| Photobacterium aphoticum | JCM 19237 | BBMN01 |
| Photobacterium angustum | S14 | AAOJ01 |
| Photobacterium damselae subsp. damselae | CIP 102761T | ADBS01 |
| Photobacterium damselae subsp. piscicida | DI21 | AKYG01 |
| Photobacterium halotolerans | S2753 | JMIB01 |
| Photobacterium halotolerans | DSM 18316T | AULG01 |
| Photobacterium leiognathi | lrivu.4.1 | BANQ01 |
| Photobacterium leiognathi subsp. mandapamensis | svers.1.1. | BACE01 |
| Photobacterium phosphoreum | ANT220 | CCAR01 |
| Photobacterium profundum | 3TCK | AAPH01 |
| Photobacterium sp. | SKA34 | AAOU01 |
| Photobacterium sp. | AK15 | AMZO01 |
| Salinivibrio costicola subsp. costicola | ATCC 33508T = LMG 11651T | ASAI01 |
| Shewanella xiamenensis | BC01 | JAEC01 |
| Vibrio albensis = V. cholerae | VL426 | ACHV01 |
| Vibrio anguillarum | 96F | AEZA01 |
| Vibrio anguillarum | RV22 | AEZB01 |
| Vibrio azureus | NBRC 104587T | BATL01 |
| Vibrio brasiliensis | LMG 20546T | AEVS01 |
| Vibrio breoganii | ZF-55 | AJYL01 |
| Vibrio campbellii | CAIM 519T = NBRC 15631T | AMDG01 |
| Vibrio caribbeanicus | ATCC BAA-2122T | AEIU01 |
| Vibrio cholerae | MO10 | AAKF03 |
| Vibrio cholerae | CP110 | AMWF01 |
| Vibrio cholerae | TM 11079-80 | ACHW01 |
| Vibrio coralliilyticus | P1 | AEQS01 |
| Vibrio coralliilyticus | ATCC BAA-450T | ACZN01 |
| Vibrio coralliilyticus | OCN008 | AVOO01 |
| Vibrio cyclitrophicus | ZF14 | AIDH01 |
| Vibrio cyclitrophicus | FF75 | ATLT01 |
| Vibrio diazotrophicus | NBRC 103148T | BBJY01 |
| Vibrio ezurae | NBRC 102218T | BATM01 |
| Vibrio fortis | Dailan14 | JFFR01 |
| Vibrio fluvialis | PG41 | ASXS01 |
| Vibrio fluvialis | I21563 | ASXT01 |
| Vibrio halioticoli | NBRC 102217T | BAUJ01 |
| Vibrio harveyi | CAIM 1792 | AHHQ01 |
| Vibrio harveyi | NBRC 15634 = ATCC 14126T | BAOD01 |
| Vibrio harveyi | ZJ0603 | AKIH01 |
| Vibrio harveyi | AOD131 | AOMR01 |
| Vibrio harveyi | E385 | AYKI01 |
| Vibrio harveyi | VHJR4 | CAUN01 |
| Vibrio harveyi | VHJR7 | CAUO01 |
| Vibrio ichthyoenteri | ATCC 700023T | AFWF01 |
| Vibrio jasicida | 090810c | BAOC01 |
| Vibrio kanaloae | 5S-149 | AJYX01 |
| Vibrio litoralis | DSM 17657T | AUFZ01 |
| Vibrio maritimus | JCM 19240 | BBMT01 |
| Vibrio maritimus | JCM 19235 | BBMR01 |
| Vibrio metschnikovii | CIP 69.14T | ACZO01 |
| Vibrio mimicus | VM223 | ADAJ01 |
| Vibrio mimicus | MB451 | ADAF01 |
| Vibrio mimicus | CAIM 602T | AOMO01 |
| Vibrio mimicus | SX-4 | ADOO01 |
| Vibrio natriegens | NBRC 15636T = ATCC 14048T = DSM 759T | ATFJ01 |
| Vibrio nigripulchritudo | ATCC 27043T | AFWJ01 |
| Vibrio nigripulchritudo | FTn2 | CANW01 |
| Vibrio nigripulchritudo | SOn1 | CAOF01 |
| Vibrio ordalii | FS-238 | AJYS01 |
| Vibrio ordalii | 12B09 | AJYV01 |
| Vibrio ordalii | FF-93 | AJYT01 |
| Vibrio ordalii | FS-144 | AJYU01 |
| Vibrio orientalis | CIP 102891T = ATCC 33934T | ACZV01 |
| Vibrio owensii | ATCC 25919 | BANZ01 |
| Vibrio owensii | CAIM 1854T | BAOH01 |
| Vibrio pacinii | DSM 19139T | JONH01 |
| Vibrio parahaemolyticus | NIHCB0603 | AVOM01 |
| Vibrio parahaemolyticus | IDH02189 | JAHD01 |
| Vibrio proteolyticus | NBRC 13287T | BATJ01 |
| Vibrio rhizosphaerae | DSM 18581T | JONG01 |
| Vibrio rotiferianus | DAT722 | AFAJ01 |
| Vibrio rumoiensis | 1S-45 | AJYK01 |
| Vibrio sagamiensis | NBRC 104589T | BAOJ01 |
| Vibrio scophthalmi | LMG 19158T | AFWE01 |
| Vibrio shilonii = V. mediterranei | AK1T | ABCH01 |
| Vibrio sinaloensis | DSM 21326 | AEVT01 |
| Vibrio sp. | PPCK-2014 | JJMN01 |
| Vibrio splendidus | ZS-139 | AJZE01 |
| Vibrio splendidus | FF-6 | AJZI01 |
| Vibrio splendidus | ATCC 33789 | AFWG01 |
| Vibrio splendidus | 12B01 | AAMR01 |
| Vibrio splendidus | 12E03 | AJZD01 |
| Vibrio splendidus | ZF-90 | AJZF01 |
| Vibrio splendidus | 5S-101 | AJZG01 |
| Vibrio splendidus | FF-500 | AJZH01 |
| Vibrio splendidus | 1F-157 | AJZJ01 |
| Vibrio splendidus | 1S-124 | AJZL01 |
| Vibrio tasmaniensis | 1F-187 | AJZM01 |
| Vibrio tasmaniensis | 1F-155 | AJZN01 |
| Vibrio tasmaniensis | 5F-79 | AJZP01 |
| Vibrio tasmaniensis | ZS-17 | AJZQ01 |
| Vibrio tubiashii | ATCC 19109T | AFWI01 |
| Vibrio tubiashii | NCIMB 1337 = ATCC 19106 | AHHF01 |
| Vibrio variabilis | JCM 19239 | BBMS01 |
| Vibrio vulnificus | BAA87 | JDSE01 |
| Vibrio vulnificus | NBRC 15645T = ATCC 27562T | AMQV01 |
| Culture collection strains used in PCR sequencing method development | ||
| Aliivibrio fischeri | DSM 2168 | KP721366 |
| Enterovibrio calviensis | DSM 14347T | KP721381 |
| Grimontia hollisae | DSM 15132T | KP721382 |
| Photobacterium damselae | ATCC 33539T | KP721367 |
| Photobacterium halotolerans | LMG 22194T | KP721368 |
| Photobacterium angustum | S14 | KP721369 |
| Photobacterium rosenbergii | LMG 22223T | KP721370 |
| Vibrio coralliilyticus | ATCC BAA-450T = DSM 19607T | KP721371 |
| Vibrio fluvialis | NCTC 11327T | KP721372 |
| Vibrio harveyi | DSM 19623T = ATCC 14126T | KP721373 |
| Vibrio nigripulchritudo | ATCC 27043T | KP721374 |
| Vibrio owensii | DY05T | KP721375 |
| Vibrio parahaemolyticus | ATCC 17802T | KP721376 |
| Vibrio splendidus | ATCC 33125T | KP721377 |
| Vibrio vulnificus | ATCC 27562T = DSM 10143T | KP721378 |
| Vibrio anguillarum | DSM 21597T | KP721379 |
| Vibrio ponticus | DSM 16217T | KP721383 |
| Vibrio chagasii | DSM 17138T | KP721384 |
| Vibrio brasiliensis | DSM 17184T | KP721385 |
| Vibrio porteresiae | DSM 19223T | KP721386 |
| Vibrio pectenicida | DSM 19585T | KP721387 |
| Salinivibrio costicola subsp. costicola | DSM 11403T | KP721380 |
| Isolates used in the testing of the PCR sequencing method | ||
| Photobacterium halotolerans | S2753 | KP721398 |
| Vibrio anguillarum | 775 | KP721388 |
| Vibrio coralliilyticus | S2043 | KP721394 |
| Vibrio coralliilyticus | S2052 | KP721395 |
| Vibrio nigripulchritudo | S2604 | KP721397 |
| Vibrio neptunius | S2394 | KP721396 |
| Vibrio parahaemolyticus | V2 | KP721401 |
| Vibrio sp. | S188 | KP721389 |
| Vibrio sp. | S203 | KP721390 |
| Vibrio sp. | S344 | KP721391 |
| Vibrio sp. | S787 | KP721392 |
| Vibrio sp. | S1110 | KP721393 |
| Vibrio sp. | S2757 | KP721399 |
| Vibrio sp. | S4497 | KP721400 |
| Vibrio sp. | VibAn | KP721402 |
a
Genomes from GenBank.