a) Scatter plots of the observed cluster size for individual gene loci (bcd, nos or Cp, shown in blue, red and purple, respectively), or the observed distance between two clusters (bcd-nos or bcd-Cp, shown in black and gray, respectively), against nurse cell nuclear diameter (see Methods for definition of cluster size and distance between clusters). Data are from WT egg chambers at stages 6~10A. Solid lines are linear fits. Blue: y = 0.54x – 0.92 μm, R2 = 0.86; red: y = 0.54x – 0.84 μm, R2 = 0.89; purple: y = 0.53x – 0.99 μm, R2 = 0.85; black: y = 0.03x + 0.94 μm, R2 = 0.09; gray: y = 0.31x + 1.25 μm, R2 = 0.57. b) The cluster size of bcd DNA FISH dots against nurse cell nuclear diameter in two inbred lines. See Supplementary Fig. 6 for spatial properties of gene loci in follicle cells.