Table 1. SLAFs data summary for parents and bulked DNA pools.

Total reads
No. of reads	6,985,489
Reads in depth> = 5	62,903
Reads in depth 10~1000	53,409
Average depth of reads depth range 10~1000	49.33
High quality SLAFs
No. of SLAFs	40,114
SNP	3,525
EnzymePos SNP (EP-SNP)	132
InDel	285
No Polymorphism	35,433
Unknown	650
Repeat	89
Polymorphic SLAF Number	3,942
Polymorphic markers between two bulked DNA pools
No of markers	227
SNP Marker	202
InDel Marker	16
EP-SNP Marker	9

SNP: single nucleotide polymorphism. EnzymePos SNP: SNP at restriction enzyme cleavage position. InDel: insertion/deletion