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. 2015 Apr;21(4):655–659. doi: 10.3201/eid2104.141355

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This is a publication of the U.S. Government. This publication is in the public domain and is therefore without copyright. All text from this work may be reprinted freely. Use of these materials should be properly cited.

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Characteristics of 50 Salmonella enterica serotype Typhi isolates. The dendrogram was generated by using BioNumerics version 6.6 software (Applied Maths, Sint-Martens-Latem, Belgium) and shows results of cluster analysis on the basis of XbaI–pulsed-field gel electrophoresis (PFGE) fingerprinting. Similarity analysis was performed by using the Dice coefficient, and clustering analysis was performed by using UPGMA. CRISPR1, clustered regularly interspaced short palindromic repeats 1; MDR, multidrug resistant; AMX, amoxicillin; STR, streptomycin; SXT, trimethoprim/sulfamethoxazole; CHL, chloramphenicol; TET, tetracycline; SPT, spectinomycin; SSS, sulfamethoxazole. Zaire is the former name of the Democratic Republic of the Congo. Plasmid multilocus sequence typing (pMLST) was performed as described for incN http://pubmlst.org/plasmid/) or incHI1 (4). Plasmid size was estimated by using S1 nuclease PFGE (14). For isolates from Africa, red indicates linage A, blue indicates lineage B, and green indicates lineage C.