Table I.
The 13 SNPs examined in the present study.
| Chromosomal locus | Gene | dbSNP (NCBI) | Nucleotide substitution | Minor allelea |
|---|---|---|---|---|
| 1q24.1 | FAM78B | rs2116519 | C→T | C |
| 3q28 | Non-gene region | rs9846911 | A→G | G |
| 4q25 | ALPK1 | rs2074379 | G→A (Met732Ile) | G |
| 4q25 | ALPK1 | rs2074380 | G→A (Gly870Ser) | A |
| 4q25 | ALPK1 | rs2074381 | A→G (Asn916Asp) | G |
| 4q25 | ALPK1 | rs2074388 | G→A (Gly565Asp) | G |
| 6p22.1 | BTN2A1 | rs6929846 | T→C | T |
| 6q27 | THBS2 | rs8089 | T→G | G |
| 13q12.1 | PDX1 | rs146021107 | G→- (deletion) | – |
| 13q34 | F7 | rs6046 | G→A (Arg353Gln) | A |
| 17q25.1 | LLGL2 | rs1671021 | G→A (Leu479Phe) | G |
| 19p13.2 | ILF3 | rs2569512 | G→A | A |
| 22q13.3 | CELSR1 | rs6007897 | C→T (Ala2268Thr) | C |
a
The minor allele in Japanese individuals was determined by the allele frequency of HapMap-JPT in dbSNP. SNPs, single nucleotide polymorphisms.