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. 2015 Mar 21;16:93. doi: 10.1186/s12859-015-0518-z

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© Harigua-Souiai et al.; licensee BioMed Central. 2015

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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SOM analysis of docking results obtained with Dock on HIV-RT. Top line, (a), (b) and (c): U-matrices; bottom line, (d), (e) and (f): docking score projections. Left column, (a) and (d): DUD-E decoys set (map dimensions (I,J,K) are (23,17,8)). Middle column, (b) and (e): DUD-E active molecules ((I,J,K) = (23,18,8)). Right column, (c) and (f)] EGF collection ((I,J,K) = (21,17,9)). Labels (2) and (3) correspond to cavity numbers used in Figure 1. They designate the AS and BS2, respectively. Regions labeled with red stars correspond to SOM regions appearing on the HIV-RT surface and considered as docking artifacts.