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. 2015 Mar 18;8:47. doi: 10.1186/s13068-015-0227-x

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© Lertwattanasakul et al.; licensee BioMed Central. 2015

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Transcript abundance of genes related to central metabolic pathways under different conditions in K. marxianus. The transcript abundance was determined by TSS analysis. The Y axis of each column graph shows the transcript abundance of each gene as TSS-tag ppm. Columns from left to right in each graph represent 30D (strong red), 30DS (soft orange), 45D (gray), and 30X (dark gray). Empty columns mean gene expression below the detectable level. (A) Central metabolic pathway. (B) Mitochondrial metabolic pathway. (C) Peroxisomal metabolic pathway. Abbreviations are as follows: G6P, glucose-6-phosphate; F6P, fructose-6-phosphate; FDP, fructose 1,6 bisphosphate; DHAP, dihydroxyacetone phosphate; DHA, dihydroxyacetone; GAP, glyceraldehyde-3-phosphate; 1,3-DPG, 1,3-bisphosphoglycerate; 3PG, 3-phosphoglycerate; 2PG, 2-phosphoglycerate; PEP, phosphoenolpyruvate; PYR, pyruvate; 6P1,5R, 6-phospho-D-glucono-1,5-lactone; 6PG, 6-phosphogluconate; Ru5P, ribulose-5-phosphate; R5P, ribose-5-phosphate; Xul5P, xylulose-5-phosphate; E4P, erythrose-4-phosphate; S7P, sedoheptulose-7-phosphate; NAD, nicotinamide adenine dinucleotide; NADP, nicotinamide adenine dinucleotide phosphate; Q, quinone; ATP, adenosine triphosphate; ADP, adenosine diphosphate.