Table 1.
Description of publicly available data sets used for principal component analyses
| Plot ID | Cell Population | GEO* samples | Sample description | Ref |
|---|---|---|---|---|
| 1 | BM osteoblastic cells (Alcam- Sca1-) | GSM437794 | BM (adult) primary stromal† Alcam- Sca1- | ‡ |
| 2 | BM osteoblastic cells (Alcam+ Sca1-) | GSM437795 | BM (adult) primary stromal† Alcam+ Sca1- | |
| 3 | BM osteoblastic cells (Pdgfrα- Sca1-) | GSM437797 | BM (adult) primary stromal† Pdgfrα- Sca1- | |
| 4 | BM osteoblastic cells ( Pdgfrα+ Sca1-) | GSM437798 | BM (adult) primary stromal† Pdgfrα+ Sca1- | |
| 5 | BM MPC’s (Pdgfrα+ Sca1+) | GSM437799 | BM (adult) primary stromal† Mesenchymal progenitor cells (MPC) (Pdgfrα+ Sca1+) | |
| 6 | BM MPC’s (Alcam+ Sca1+) | GSM437796 | BM (adult) primary stromal† Mesenchymal progenitor cells (MPC) (Alcam+ Sca1+) | |
| 7 | BM MSC-like derived clones | GSM795638-40 | BM MSC-derived cell line, Wnt1Cre/R26R β-gal- selected clone passage>10 | § |
| 8 | BM NCSC-derived clones | GSM795641-43 | BM NCSC-derived cell line, Wnt1Cre/R26R β-gal- selected clone passage>10 | |
| 9 | E13.5 vascular segment (mesoderm-derived) | GSM261911 | E13.5 internal carotid artery vascular segment (smooth muscle mesoderm-derived) | ¶ |
| 10 | E13.5 vascular segment (NC derived) | GSM261912 | E13.5 external carotid artery vascular segment (smooth muscle NC-derived) | |
| 11 | BM (adult) Nes-GFP+ | GSM545815-17 | BM (adult) primary (CD45-) Nes-GFP+ cells | ** |
| 12 | BM (adult) Scf-GFP+ | GSM821066-68 | BM (adult) primary Scf-GFP+ cells | †† |
| 13 | P0 Schwann cells | GSM15386-88 | P0 primary Schwann cells (Plp-GFP+) from sciatic nerve | ‡‡ |
| 14 | E12.5 Schwann cell precursors (SCPs) | GSM15373-75 | E12.5 primary Schwann cell precursors (Plp-GFP+) from sciatic nerve | |
| 15 | E14.5 Enteric Neural crest cells (ENCC) | GSM844492-94 | E14.5 primary ENCCs (Wnt1Cre/R26-YFP+) from gut | |
| 16 | E9.5 Neural crest stem cells (NCSC) | GSM15370-72 | E9.5 trunk primary Plp-GFP+ cells (migrating NCSCs) | |
| 17 | E18.5 Schwann cells | GSM15383-85 | E18.5 primary Schwann cells (Plp-GFP+) cells from sciatic nerve |
Gene Expression Omnibus database (http://www.ncbi.nlm.nih.gov/geo/).
CD45-CD31-Ter119-.
References:.
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