Table 1.
Primers used to amplify rat bone and muscle markers
Gene primer sequences 5′ to 3′ | Td | Amplicon | Accession number |
---|---|---|---|
Bone markers | |||
Rat Osteocalcin | 285 bp | M23637 | |
F gcc cag cga ctc tga gtc tg | 67.2 | ||
R cca atg tgg tcc gct agc tc | 67.2 | ||
Rat Bone Sialoprotein | 264 bp | DQ213013 | |
F gta ccg gcc acg cta ctt tc | 66.5 | ||
R cca gcg tca gct gtg gtc tc | 68.0 | ||
Rat Alkaline phosphatase | 260 bp | J03572 | |
F ccc tgc aac cat cat gga ac | 67.4 | ||
R gaa ggg ttg gcg agt ctc tg | 66.2 | ||
Rat Osteopontin | 289 bp | M14656 | |
F gcc agc ctg gaa cat cag ag | 67.1 | ||
R aag ctc agg gcc caa aac ac | 68.2 | ||
Rat Collagen I alpha 1 | 275 bp | XM_213440 | |
F ggg gtg gga agg aat ttc tg | 67.3 | ||
R tag gga gca gca gca aga gg | 67.2 | ||
Rat Cbfa1 | 221 bp | AB025797 | |
F agt ggc cag gtt caa cga tc | 66.3 | ||
R tgc gcc cta aat cac tga gg | 67.8 | ||
Muscle markers | |||
Rat Myosin 1 | 250 bp | X68199 | |
F aag cag cta gta agg gtg act ttc | 65.2 | ||
R ctc act taa ggg aca gcg act tc | 66.7 | ||
Rat Actin alpha | 329 bp | NM_019183 | |
F tcc cag cac cat gaa gat taa g | 66.1 | ||
R agg ttg caa gtc ctg gtc tg | 64.0 | ||
Housekeeping gene | |||
Rat Gapdh | 188 bp | AF106860 | |
F aag ggc atc ctg ggc tac ac | 68.0 | ||
R gag gcc atg tag gcc atg ag | 66.9 |