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. 2015 Apr 1;10(4):e0119448. doi: 10.1371/journal.pone.0119448

Table 4. Number of differentially methylated genes by different statistical tests for Dataset 3, where #G hyper and #G hypo refer to hyper and hypo-methylated genes, respectively.

parametric tests at 0.05 p-value cutoff non-parametric tests at 0.05 p-value cutoff
t-test Welch’s t-test Bayes t-test Pearson’s correlation common Limma SAM Wilcoxon permute common
#G hyper 652 652 507 87 74 185 185 181 186 181
#G hypo 676 676 600 129 118 165 165 163 166 163