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. 2015 Apr 1;10(4):e0119448. doi: 10.1371/journal.pone.0119448

Table 5. Number of differentially expressed genes by different statistical tests for the artificial Dataset 4, where #G up, #G down denote up-regulated and down-regulated genes, respectively.

parametric tests at 0.05 p-value cutoff non-parametric tests at 0.05 p-value cutoff
t-test Welch’s t-test Bayes’ t-test Pearson’s correlation common Limma SAM Wilcoxon permute common
#G up 90 89 87 56 51 570 573 594 575 532
#G dw 29 29 28 23 23 342 342 365 373 336