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. Author manuscript; available in PMC: 2015 Apr 2.
Published in final edited form as: Am J Med Genet A. 2014 Mar 25;0(6):1454–1463. doi: 10.1002/ajmg.a.36478

TABLE IV.

Adjusted Associations* Between Maternal Smoking from the Month Before Through the Third Month of Pregnancy and Selected Xenobiotic Metabolizing Enzyme Gene Variants and Gastroschisis for Non-Hispanic White and Hispanic Mothers and Infants Using Data from the National Birth Defects Prevention Study, 1997-2003.

Variant
Alleles**
Maternal
Smoking
Control Case aOR (95% CI) P Control Case aOR (95% CI) P
Infants Mothers
Non-Hispanic White
CYP1A1*2A
Absent None 598 25 Referent 681 37 Referent
Present None 166 13 1.56 (0.73-3.36) 0.25 192 13 1.00 (0.48-2.05) 1.00
Absent Any 136 33 Referent 181 49 Referent
Present Any 37 8 0.89 (0.36-2.17) 0.79 46 6 0.38 (0.15-0.98) 0.05
CYP1A2*1C
Absent None 744 33 Referent 841 47 Referent
Present None 20 5 3.19 (0.93-10.98) 0.07 32 3 n/c
Absent Any 162 39 Referent 221 54 Referent
Present Any 9 2 n/c 5 1 n/c
CYP1A2*1F
Absent None 385 15 Referent 452 21 Referent
Present None 379 23 1.80 (0.87-3.72) 0.11 421 29 1.69 (0.90-3.19) 0.10
Absent Any 80 23 Referent 93 25 Referent
Present Any 92 18 0.74 (0.36-1.52) 0.42 133 30 1.04 (0.56-1.95) 0.89
NAT2*5
Absent None 226 12 Referent 265 11 Referent
Present None 538 26 1.20 (0.56-2.58) 0.64 608 39 1.57 (0.75-3.30) 0.23
Absent Any 46 12 Referent 67 16 Referent
Present Any 127 29 1.09 (0.50-2.40) 0.83 160 37 0.95 (0.48-1.88) 0.89
NAT2*6
Absent None 381 14 Referent 437 20 Referent
Present None 383 24 1.52 (0.73-3.14) 0.26 435 30 1.55 (0.82-2.92) 0.17
Absent Any 78 23 Referent 104 24 Referent
Present Any 95 18 0.69 (0.34-1.41) 0.30 123 31 1.17 (0.63-2.16) 0.63
Hispanic
CYP1A1*2A
Absent None 85 13 Referent 108 17 Referent
Present None 153 22 0.97 (0.45-2.10) 0.94 168 30 1.09 (0.56-2.13) 0.80
Absent Any 10 1 Referent 9 3 Referent
Present Any 16 4 n/c 19 8 n/c
CYP1A2*1C
Absent None 117 14 Referent 133 18 Referent
Present None 122 21 1.51 (0.71-3.20) 0.28 144 29 1.48 (0.76-2.85) 0.25
Absent Any 15 2 Referent 14 4 Referent
Present Any 11 3 n/c 14 7 1.75 (0.42-7.40) 0.44
CYP1A2*1F
Absent None 114 12 Referent 147 20 Referent
Present None 125 23 2.10 (0.96-4.59) 0.06 130 27 1.61 (0.84-3.09) 0.15
Absent Any 11 2 Referent 10 5 Referent
Present Any 15 3 n/c 18 6 0.65 (0.15-2.84) 0.57
NAT2*5
Absent None 113 16 Referent 130 20 Referent
Present None 126 19 1.07 (0.51-2.24) 0.86 147 27 1.36 (0.70-2.61) 0.36
Absent Any 13 1 Referent 12 3 Referent
Present Any 13 4 n/c 16 8 n/c
NAT2*6
Absent None 157 18 Referent 189 25 Referent
Present None 82 17 2.11 (1.00-4.48) 0.05 88 22 2.17 (1.12-4.19) 0.02
Absent Any 15 3 Referent 18 7 Referent
Present Any 11 2 n/c 10 4 1.03 (0.24-4.40) 0.97
*

Adjusted for maternal age at delivery (continuous)

**

Dominant mode of inheritance used for CYP1A1*2A, CYP1A2*1C, NAT2*5, and NAT2*6; Recessive mode of inheritance used for CYP1A2*1F

n/c= not calculated because of low numbers (< 4)