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Empirical Type I error rates in 10 genome scans using MGAS
| Nominal α | ||||
|---|---|---|---|---|
| 0.01 | 0.001 | 0.0001 | ||
| Small genes | ≤10 | 0.0107 | 0.00116 | 0.000112 |
| Larger genes | >10 | 0.0128 | 0.00151 | 0.000108 |
Note. Type I error rates of MGAS for small genes (≤10 SNPs) and larger genes (>10 SNPs) obtained in 10 whole-genome scans of real genomic data and nine simulated phenotypes with realistic correlational structure.
