Table 1.
Mean precision values for the top-L, top-L/2, top-L/5 and top-L/10 contacts, L = length of target protein, at different sequence separation ranges i − j ≥ 5 and i − j ≥ 23, where the Cβ–Cβ distance <8 Å
[i − j] ≥ 5 |
[i − j] ≥ 23 |
|||||||
---|---|---|---|---|---|---|---|---|
L | L/2 | L/5 | L/10 | L | L/2 | L/5 | L/10 | |
Net only | 0.37 | 0.41 | 0.52 | 0.66 | 0.25 | 0.32 | 0.40 | 0.43 |
PSICOV | 0.45 | 0.60 | 0.73 | 0.79 | 0.34 | 0.48 | 0.65 | 0.73 |
DCA | 0.45 | 0.56 | 0.66 | 0.72 | 0.36 | 0.49 | 0.64 | 0.71 |
CCMpred | 0.52 | 0.67 | 0.77 | 0.81 | 0.39 | 0.55 | 0.71 | 0.76 |
Consensus only | 0.51 | 0.65 | 0.77 | 0.81 | 0.39 | 0.54 | 0.70 | 0.77 |
PconsC | 0.56 | 0.69 | 0.77 | 0.79 | 0.46 | 0.62 | 0.75 | 0.80 |
MetaPSICOV (stage 1) | 0.66 | 0.79 | 0.90 | 0.95 | 0.47 | 0.63 | 0.78 | 0.85 |
MetaPSICOV (stage 2) | 0.71 | 0.83 | 0.91 | 0.94 | 0.54 | 0.70 | 0.83 | 0.88 |