Table 1. The Entrez databases (as of 3 September 2014).
Database | Records | Section within this article | Data sourcea |
---|---|---|---|
Site search | 21 929 | Introduction | N |
MedGenb | 260 796 | Recent developments | C, N |
ClinVarb | 124 671 | Recent developments | D, N |
GTRb | 32 152 | Recent developments | D |
PubMed | 24 157 837 | Literature | C |
PubMed Central | 3 201 919 | Literature | D, C |
NLM Catalog | 1 507 828 | Literature | C, N |
MeSH | 253 057 | Literature | N |
Books | 337 275 | Literature | C, N |
Taxonomyb | 1 288 515 | Taxonomy | C, N |
Nucleotideb | 146 035 069 | DNA and RNA | D (GenBank), C, N |
ESTb | 75 673 561 | DNA and RNA | D (GenBank) |
GSSb | 37 613 795 | DNA and RNA | D (GenBank) |
BioSample | 2 734 070 | DNA and RNA | D |
SRAb | 963 108 | DNA and RNA | D |
PopSetb | 207 794 | DNA and RNA | D (GenBank) |
Proteinb | 147 483 171 | Proteins | C, N |
Protein Clustersb | 820 546 | Proteins | N |
Structureb | 102 343 | Proteins | C, N |
CDDb | 49 641 | Proteins | C, N |
GEO Profilesb | 108 686 654 | Genes and expression | D |
Probe | 31 887 935 | Genes and expression | D |
Geneb | 17 530 632 | Genes and expression | C, N |
UniGeneb | 6 473 284 | Genes and expression | N |
GEO Data Setsb | 1 295 573 | Genes and expression | D |
Biosystemsb | 619 468 | Genes and expression | C |
Homologeneb | 141 268 | Genes and expression | N |
Cloneb | 36 916 420 | Genomes | D, N |
BioProjectb | 134 582 | Genomes | D |
Assembly | 32 501 | Genomes | C, N |
Genomeb | 10 244 | Genomes | C, N |
Epigenomicsb | 6634 | Genomes | D |
SNPb | 394 164 715 | Genetics and medicine | D (dbSNP), N |
dbVarb | 4 155 758 | Genetics and medicine | D |
dbGaP | 163 310 | Genetics and medicine | D |
PubMed Health | 49 278 | Genetics and medicine | C |
PubChem Substanceb | 157 203 085 | Chemicals and bioassays | D |
PubChem Compoundb | 53 371 491 | Chemicals and bioassays | N |
PubChem Bioassayb | 1 091 044 | Chemicals and bioassays | D |
aD = direct submission; C = collaboration/agreement; N = internal NCBI/NLM curation.
bIndicates that the data in this resource are available by FTP.