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. 2014 Nov 26;43(Database issue):D670–D681. doi: 10.1093/nar/gku1177

Table 2. New annotation tracks in the Genome Browser.

Annotation track name Track group Assembly
Human genome
Centromere locations Mapping hg38
Chromosome Bands Localized by FISH Mapping Clones Mapping hg38
GRC Incident Database Mapping hg38
Locus Reference Genome (LRG) Regions Mapping hg19, hg38
Gene Annotations from GENCODE Version 19 (Ensembl 76) Genes hg19, hg38
Ensembl Genes 74, 75 Genes hg19
UCSC Genes Genes hg38
ClinVar Variants Phenotype hg19
DNA Sequences in Web Pages Indexed by Bing.com/Microsoft Research Phenotype hg19
Genetic Association Studies of Complex Diseases and Disorders (update) Phenotype hg19
GeneReviews Phenotype hg38
OMIM Genes Phenotype hg38
Genome Segmentations from ENCODE Regulation hg19
Transcription Factor ChIP-seq (161 factors) from ENCODE with Factorbook Motifs Regulation hg19
UCSF Brain DNA Methylation Regulation hg19
Database of Genomic Variants: Structural Variation (update) Variation hg18, hg19
NHLBI GO Exome Sequencing Project (ESP)—Variants from 6503 Exomes Variation hg19
Simple Nucleotide Polymorphisms (dbSNP 141) Variation hg19
SNP 135/137 (corrections) Variation hg19
Alpaca, American alligator, Cat, Chinese hamster, Hedgehog, Pika, Sheep, Shrew, Tenrec, Zebra finch Chain/Net tracks Comparative hg19
Multiz Alignment & Conservation (seven species) Comparative hg38
Vertebrate Multiz Alignment & Conservation (100 Species) Comparative hg19
Multiz Alignment & Conservation (seven species) Comparative hg38
phastBias gBGC predictions Comparative hg18, hg19
Mouse genome
INSDC Chromosome Names Mapping mm10
MGI Quantitative Trait Loci Mapping mm10
Ensembl Genes v74, v75 Genes mm10
Ensembl Genes v73 Genes mm9
GENCODE Genes vM2 Genes mm10
UCSC Genes Genes mm10
DNA Sequences in Web Pages Indexed by Bing.com/Microsoft Research Literature mm9
FaceBase 24 Sample Types Expression mm10
SNP 138 Variation mm10
Alpaca, Human, Shrew Chain/Net tracks Comparative mm10
Vertebrate Multiz Alignment and Conservation (60 species) Comparative mm10
Other genomes
Accession at International Nucleotide Sequence Database Collaboration (INSDC) Mapping 46 species
Ensembl Genes v74 Genes 17 species
Ensembl Genes v75 Genes 41 species