Table 1. Major improvements as provided in the ChiTaRS-2.1 database.
Features | ChiTaRS version 1.0 | ChiTaRS version 2.1 |
---|---|---|
Species | 3 species | 8 species |
Number of chimeric transcripts | 16 261 | 29 164 |
Chimeras validated by more than two RNA-seq reads spanning the junction site | 175 | 337 |
Cancer breakpoints | 1286 | 1428 |
Manually verified breakpoints | 456 | 1428 |
UniProt cross-references | NA | 2229 |
Sense–antisense chimeras | NA | 6044 |
iHop cross-links | NA | 48 586 |
Comparison and analysis of species | Not Available | Available |
SpliceGraphs | 8000 | 8232 |