Table 1. Current contents of EzCatDB.
Related data | Descriptiona | Number of corresponding dataa,b |
---|---|---|
DB codes for EzCatDB | Entry ID in this EzCatDB database | 871 EzCatDB entries |
RLCP classification | Hierarchic classification of reaction mechanisms | 516 EzCatDB entries for 439 RLCP classes |
Compound data | Compound data for substrates/products/cofactors | 1106 compound data |
1020 KEGG compounds (9) /86 EzCatDB compounds | ||
Intermediate data | Compound data for intermediates | 151 intermediate data |
3 KEGG compounds (9) /148 EzCatDB intermediates | ||
E.C. numbers | Enzyme commission number (1–3) | 667 E.C. numbers |
Catalytic domains | Catalytic domains of enzyme structures that have active-site residues, based on CATH classification (25). | 335 CATH domains (25) |
UniProtKB | Protein sequence data from UniProtKB (5) | 1612 sequences (1413 representative sequences) |
PDB | Tertiary structure data from Protein Data Bank (6) | 6704 PDB entries (6) for 871 EzCatDB entries |
aReference numbers are shown in parentheses.
bThe number of data might change through update.