| ENA |
European Nucleotide Archive; provides the
complete set of ncRNA sequence data reported by the scientific community to the
databases of the International Nucleotide Sequence Database Collaboration (INSDC;
(17)) as part of conventional scientific
best practice (10). |
http://www.ebi.ac.uk/ena/
|
| Rfam |
Database of ncRNA families and
cis-regulatory elements with a broad taxonomic coverage (5). |
http://rfam.xfam.org/
|
| RefSeq |
A comprehensive, non-redundant,
well-annotated set of reference sequences including genes and transcripts (11). |
http://www.ncbi.nlm.nih.gov/refseq/
|
| VEGA |
Database of vertebrate gene annotation that
provides a high-quality set of lncRNAs produced by manual annotation (12,13). |
http://vega.sanger.ac.uk
|
| gtRNAdb |
Contains tRNA gene predictions on complete
or nearly complete genomes from a broad range of species (4). |
http://gtrnadb.ucsc.edu/
|
| miRBase |
miRBase is a database of published microRNA
sequences and annotations (3). |
http://mirbase.org/
|
| RDP |
Provides a quality-controlled, aligned and
annotated set of small ribosomal subunit RNA sequences (14). |
http://rdp.cme.msu.edu/
|
| tmRNA Website |
Provides information about the tmRNA
molecule found in bacteria and some organelles (15). |
http://bioinformatics.sandia.gov/tmrna/
|
| SRPDB |
Provides information about the signal
recognition particle RNA molecule (16). |
http://rnp.uthscsa.edu/rnp/SRPDB/SRPDB.html
|
| lncRNAdb |
Provides comprehensive information about
experimentally characterized lncRNA molecules (9). |
http://www.lncrnadb.org/
|
