Table 2.
Enrichment analysis of LXS exon array genes correlated to ST or RT.
| Annotation cluster #1 |
Representative Terms: ST_sal2 |
Annotation cluster #1 |
Representative Terms: ST_Et2 |
Annotation cluster #1 |
Representative Terms: RT2 |
|---|---|---|---|---|---|
| (No significant GOTERM_BP_FAT terms) | 1 (3.5) | Oxidation reduction (24) | 1 (3.9) |
Cell-cell adhesion (14) Homophilic cell adhesion (11) |
|
| 7 (1.5) | Lipid biosynthetic process (13) | 3 (2.0); 4 (2.0) |
Transcription (51) Positive regulation of transcription (20) |
||
| 22 (NS) | Heart morphogenesis (6) | 11 (1.4) | Striated muscle cell development (7) | ||
| 23 (NS) | Chromatin modification (12) | ||||
| 27 (NS) | Cellular component morphogenesis (17) |
1
Number in parentheses is the Enrichment Score for each cluster; the score of 1.3 is equivalent to non-log scale p of 0.05 (Huang et al., 2009). In one case, distinct clusters contained similar terms; these have been grouped here (see supplemental Table S-1). NS: Enrichment Score < 1.3.
2
Number in parentheses indicates the number of genes found within that term; terms are from GOTERM_BP_FAT (FDR≤0.10).