Table 9.
Approach | E T | SC | E ED | E SN |
---|---|---|---|---|
INFO-RNA | 43.79 | 32 | 54.86 | 28.69 |
MODENA | 165.86 | 395 | 27.05 | 35.73 |
NUPACK | 483.41 | 336 | 20.21 | 38.91 |
RNAifold | 1888.32 | 272 | 29.09 | 31.12 |
ERD | 6.11 | 401 | 13.22 | 39.44 |
ERD-EC | 217.99 | 386 | 7.94 | 39.88 |
The comparison of expected time (E T), success count (SC), expected energy distance (E ED), and expected similarity to the natural sequences (E SN) between the existing approaches for dataset C. ERD-EC is related to the ERD when the energy constraint is specified. The SC indicates how many sequences are successfully designed. The best results are indicated in bold face.