TABLE 2.
psl ORFs PA2231 to PA2245 with proposed roles in polysaccharide synthesis
Gene | ORF | No. of amino acids, predicted mass (kDa) | % Similarity or homology to another protein |
---|---|---|---|
pslA | PA2231 | 478, 54.8 | 69, to colonic acid UDP-glucose lipid carrier, WcaJ (E. coli) |
pslB | PA2232 | 488, 53.5 | 72, to PMI/GDP-mannose pyrophosphorylase WbpW (P. aeruginosa) |
pslC | PA2233 | 303, 33.6 | 59, to rhamnosyl transferase RfbN (Salmonella) |
pslD | PA2234 | 256, 27.9 | 47, to amylovoran export protein AmsH (Erwinia) |
pslE | PA2235 | 662, 74.5 | 40, to xanthan translocation protein GumC (Xanthomonas) |
pslF | PA2236 | 395, 42.7 | 38, to beta-xylosidase (Caldicellulosiruptor) |
pslG | PA2237 | 442, 50.0 | 43, to putative GlcNAc transferase (Bordetella) |
pslH | PA2238 | 402, 44.6 | 43, to putative galactosyltransferase (Archaeoglobus) |
pslI | PA2239 | 367, 40.6 | 42, to glycosyltransferase WbpY (P. aeruginosa) |
pslJ | PA2240 | 478, 52.5 | 43, to putative polysaccharide polymerase (Streptococcus pneumoniae) |
pslK | PA2241 | 469, 49.6 | 45, to putative membrane-associated virulence factor MviN (E. coli) |
pslL | PA2242 | 355, 39.9 | Unknown (hypothetical protein) |
pslM | PA2243 | 577, 61.5 | 49, to hypothetical protein Rv3537 (Mycobacterium tuberculosis) |
pslN | PA2244 | 333, 38.0 | Unknown (hypothetical protein) |
pslO | PA2245 | 101, 10.6 | Unknown (hypothetical protein) |