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. 2015 Apr 6;10(4):e0123745. doi: 10.1371/journal.pone.0123745

Table 3. Differentially expressed functional categories indicative of M. tb respiratory and metabolic state in type II AEC.

Functional Group Description/Association # of Genes Hypergeometric Probability (P value) Range of Fold Change
NADH DH1 (14) a Aerobic respiration 7 (up) 2.66E-05 (2.90E-05) b +2.3 to +5.4
Cytochrome c Reductase (3) Aerobic respiration 2 (up) 0.01807 (0.01895) +2.5 to +3.6
Cytochrome c Oxidase (4) Aerobic respiration 1 (up) 0.1888 (0.2076) +3.2
NADH DH2 (2) Alternative Electron Transfer NDE N/A N/A
Nitrate Reductase & Transport (5) Non-aerobic respiration 3 (down) 0.000367 (0.0003705) -2.1 to -6.6

a Number within parentheses indicates total number of genes in the M. tb genome within this functional group

b Bold number within parentheses indicates statistical significance, i.e., P value ≤ 0.05