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. 2015 Mar 26;71(Pt 4):742–753. doi: 10.1107/S1399004715000292

Table 2. Structure solution and refinement.

Values in parentheses are for the outer shell.

PDB code 4wld 4wlt 4wlx 4wly 4wm1 4wm2 4wm3 4wm4 4wm5 4wm6 4xen
Pressure (MPa) 0.1 190 280 380 500 600 710 800 890 950 920
No. of reflections, working set 16667 15188 15164 13435 14528 14593 15945 14276 14298 30495 15797
No. of reflections, test set 896 800 794 716 762 766 851 752 758 1606 839
R work (%) 14.51 15.30 15.18 15.45 16.01 15.53 18.14 16.76 16.30 19.92 16.40
R free (%) 17.42 19.70 19.31 19.38 20.80 20.09 25.91 22.38 21.67 28.45 20.94
Cruickshank DPI 0.07 0.08 0.08 0.10 0.09 0.09 0.09 0.10 0.09 0.24 0.09
No. of non-H atoms
Protein 1009 1031 1031 1031 1020 1025 1023 1032 1026 4013 1063
Ligand/ion 1 7 7 7 7 5 4 5 5 4 62
Water 100 118 129 135 142 144 149 164 171 615 172
Total 1110 1156 1167 1173 1169 1174 1176 1201 1202 4632 1297
B factor (2)
Protein 25.14 18.79 16.99 19.32 17.63 14.65 16.76 15.74 16.28 17.38 11.92
Ligand/ion 39.51 37.17 34.76 34.14 29.83 27.80 22.17 29.27 28.95 29.56 23.32
Water 38.72 33.21 32.34 34.41 33.10 28.64 29.78 30.53 30.31 24.16 27.08
R.m.s.d. from ideality
Bond lengths () 0.024 0.024 0.024 0.024 0.025 0.022 0.022 0.025 0.023 0.015 0.021
Bond angles () 2.166 2.151 2.146 2.099 2.157 2.132 2.132 2.011 2.036 1.728 2.202
Ramachandran plot
Most favoured (%) 99 99 98 98 98 98 98 98 98 96 97
Allowed (%) 1 1 2 2 2 2 2 2 2 4 3

R work is defined as Inline graphic Inline graphic.

R free is calculated using 5% of the data that were randomly chosen and excluded from the refinement.