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. 2015 Apr 7;10(4):e0122396. doi: 10.1371/journal.pone.0122396

Table 1. Summary of RNA-seq alignment.

Sample ID Total tags (Million) Mapping rate% CDS exons (%) 5' UTR (%) 3'UTR (%) Intron (%)
H611 44.92 79.98 65.20 1.73 11.90 5.42
H1103 42.73 80.91 67.88 1.76 11.74 4.70
H710 47.36 82.69 72.90 1.57 10.20 3.51
H712 43.69 85.79 71.00 1.08 10.32 4.52
H906 45.26 82.96 68.69 1.54 11.47 4.50
H909 39.29 85.79 66.94 1.05 11.20 6.04

BH: Songliao Black pigs with higher backfat of live group

BL:Songliao Black pigs with lower backfat of live group

H710, H712 and H906, H909 are two pair full-sibs pigs. H710, H906,H611 and H712, H909, H1103 are the BH and BL groups respectively.