Table 1. Bacterial strains and plasmids used in this study.
Strain of plasmid | Characteristic a | Source or reference |
---|---|---|
Strain | ||
Escherichia coli | ||
DH5α | General cloning host | |
ET12567 / pUZ8002 | Strain for intergeneric conjugation; Kmr, Cmr | [37] |
Pseudonocardia autotrophica | ||
KCTC9441 | Wild-type, NPP producing strain | KCTC |
ESK601 | nppDI mutant producing 10-deoxyaglycone | [23] |
ESK602 | nppDI-complemented ESK601 | [23] |
ESK6011 | nppY mutant producing 10-deoxynystatin | This work |
ESK6012 | nppY-complemented ESK6011 | This work |
ESK60111 | ESK6011 harboring plasmid pYM1 | This work |
ESK60112 | ESK6011harboring plasmid pYM2 | This work |
ESK60113 | ESK6011 harboring plasmid pYM3 | This work |
ESK60114 | ESK6011 harboring plasmid pYM4 | This work |
ESK60115 | ESK6011 harboring plasmid pYM5 | This work |
ESK60116 | ESK6011 harboring plasmid pYM6 | This work |
ESK60117 | ESK6011 harboring plasmid pYM7 | This work |
ESK60118 | ESK6011 harboring plasmid pYM8 | This work |
ESK60119 | ESK6011 harboring plasmid pYM9 | This work |
ESK6021 | nppL mutant producing C10 deoxy NPP | This work |
ESK6022 | nppL-complemented ESK6021 | This work |
ESK611 | nppDI nppY double mutant producing 10-deoxyaglycone | This work |
ESK612 | nppDI-complemented ESK611 | This work |
ESK613 | nppY-complemented ESK611 | This work |
ESK614 | nppDI nppY-double complemented ESK611 | This work |
ESK621 | nppDI nppL double mutant producing 10-deoxyaglycone | This work |
ESK622 | nppDI-complemented ESK621 | This work |
ESK623 | nppL-complemented ESK621 | This work |
ESK624 | nppDI nppY-double complemented ESK621 | This work |
ESK631 | nppY nppL double mutant producing 10-deoxynystatin | This work |
ESK632 | nppY-complemented ESK631 | This work |
ESK633 | nppL-complemented ESK631 | This work |
ESK634 | nppY nppL-double complemented ESK631 | This work |
ESK641 | nppDI nppY nppL triple mutant producing 10-deoxyaglycone | This work |
ESK642 | nppDI-complemented ESK641 | This work |
ESK643 | nppDI nppY-complemented ESK641 | This work |
ESK644 | nppDI nppY nppL-complemented ESK641 | This work |
Plasmid | ||
pTY | Template plasmid for nppY mutation, Amr | This work |
pDELY | Plasmid for deletion nppY gene, Aprr | This work |
pDELL | Plasmid for deletion nppL gene, Aprr | This work |
ermE*pSET152 | E. coli-P. autotrophica conjagative vector with constitutive promoter, ermE*, Aprr | [38] |
pMJPDI | Plasmid for nppDI complementation, Aprr | [23] |
pPY | Plasmid for nppY complementation, Aprr | This work |
pPL | Plasmid for nppL complementation, Aprr | This work |
pPDIY | Plasmid for nppDI nppY complementation, Aprr | This work |
pPDIL | Plasmid for nppDI nppL complementation, Aprr | This work |
pPYL | Plasmid for nppY nppL complementation, Aprr | This work |
pYM1 | pPY with additional 7 amino acids (FARSYTP), Hygr | This work |
pYM2 | pPY with A37N mutation, Hygr | This work |
pYM3 | pPY with E197K mutation, Hygr | This work |
pYM4 | pPY with R200N mutation, Hygr | This work |
pYM5 | pPY with I201Q mutation, Hygr | This work |
pYM6 | pPY with R219V mutation, Hygr | This work |
pYM7 | pPY with R247E mutation, Hygr | This work |
pYM8 | pPY with I385Y mutation, Hygr | This work |
pYM9 | pPY combined with C-terminal domain of NppDI, Hygr | This work |
aKmr, kanamycin resistance; Cmr, chloramphenicol resistance; Amr, ampicillin resistance; Aprr, apramycin resistance; Hygr, hygromycin resistance.