Table 3.
The number of interactions for 14 out of 38 transcription factors changed dramatically from normal to metastasis stage (fold change >2)
Gene name | Normal | Adjacent | Tumor | Metastasis | Fold change |
---|---|---|---|---|---|
HOXB13 | 143 | 176 | 43 | 52 | 2.75 |
ZEB1 | 135 | 137 | 74 | 33 | 4.09 |
SIM2 | 120 | 132 | 115 | 25 | 4.80 |
TFAP2A | 60 | 30 | 25 | 63 | 0.95 |
ZNF205 | 56 | 38 | 28 | 44 | 1.27 |
EZH2 | 46 | 24 | 81 | 81 | 1.76 |
MXD4 | 43 | 31 | 32 | 69 | 1.60 |
ZNF146 | 42 | 45 | 60 | 72 | 1.71 |
CAMTA1 | 41 | 22 | 21 | 37 | 1.11 |
MAZ | 39 | 64 | 56 | 46 | 0.85 |
PLAGL1 | 26 | 36 | 39 | 30 | 0.87 |
HOXC6 | 34 | 53 | 78 | 47 | 1.38 |
FOS | 63 | 49 | 69 | 65 | 0.97 |
ELK4 | 35 | 34 | 17 | 33 | 0.94 |
NKX2-2 | 28 | 33 | 43 | 30 | 0.93 |
MNX1 | 26 | 20 | 29 | 70 | 2.69 |
AR | 103 | 61 | 35 | 48 | 2.15 |
PBX1 | 45 | 64 | 117 | 37 | 0.82 |
FOXA1 | 108 | 153 | 41 | 34 | 3.18 |
INSM1 | 21 | 26 | 23 | 32 | 0.66 |
STAT1 | 113 | 97 | 122 | 16 | 7.06 |
HLF | 123 | 120 | 86 | 25 | 4.92 |
TCF21 | 59 | 102 | 58 | 25 | 2.36 |
ISL1 | 65 | 26 | 68 | 22 | 2.95 |
GATA3 | 42 | 34 | 68 | 22 | 1.91 |
KLF6 | 76 | 26 | 20 | 37 | 2.05 |
SMAD3 | 41 | 18 | 28 | 40 | 1.03 |
NHLH2 | 27 | 18 | 32 | 34 | 0.79 |
EGR3 | 32 | 35 | 40 | 26 | 1.23 |
FOXF1 | 32 | 151 | 129 | 26 | 0.81 |
ATF6 | 44 | 27 | 17 | 40 | 1.1 |
VDR | 30 | 27 | 18 | 33 | 0.91 |
FOXC1 | 14 | 42 | 68 | 33 | 2.36 |
STAT2 | 23 | 32 | 19 | 34 | 0.68 |
JUNB | 21 | 50 | 47 | 48 | 2.29 |
RARB | 21 | 31 | 27 | 26 | 0.81 |
SNAI2 | 25 | 25 | 34 | 24 | 1.04 |
ZNF529 | 10 | 26 | 24 | 42 | 4.2 |