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. 2015 Apr 8;6:136. doi: 10.3389/fgene.2015.00136

Table 3.

PCSK9 rare variants in the exome chip data.

No SNP rs# Location on chromosome 1 Nucleotide position Protein position Annotation MAF Number of carriers HWE P-value SBP median DBP median
1 exm62588 rs11591147 55505647 c.137 G>T p.R46L Non-synonymous 0.002 9 1 137 89
2 exm62591 rs145886902 55505679 c.169 G>A p.E57K Non-synonymous 0.002 8 1 133 66
3 exm62606 rs67608943 55512222 c.426 C>G p.Y142X Stop-gain 0.004 15 1 116 75
4 exm62607 Not available 55512267 c.471 C>A p.N157K Non-synonymous 0.0002 1 1 165 97
5 exm2263347 rs149489325 55518371 c.706 G>A p.G236S Non-synonymous 0.002 3 1 135 81
6 exm62636 rs72646508 55518422 c.757 C>T p.L253F Non-synonymous 0.003 14 1 128 75
7 exm62652 Not available 55523076 c.1069C>T p.R357C Non-synonymous 0.0002 1 1 122 75
8 exm62659 rs146471967 55523178 c.1171 C>A p.H391N Non-synonymous 0.002 10 1 138 82
9 exm62666 rs143275858 55523779 c.1251 C>A p.H417Q Non-synonymous 0.002 7 1 132 78
10 exm62667 rs28362261 55523802 c.1274 A>G p.N425S Non-synonymous 0.01 72 0.139 135 79
11 exm62678 rs141502002 55524222 c.1405 C>T p.R469W Non-synonymous 0.01 40 0.211 129 76
12 exm1834776 rs141995194 55524262 c.1445 A>G p.E482G Non-synonymous 0.002 6 1 130 80
13 exm62699 rs28362270 55525313 c.1658 A>G p.H553R Non-synonymous 0.01 55 0.3558 134 76
14 exm62700 rs140364657 55525315 c.1851 C>G p.Q554E Non-synonymous 0.001 6 1 135 78
15 exm62708 rs28362277 55527222 c.1856 A>C p.Q619P Non-synonymous 0.01 60 1 146 84
16 exm62720 rs28362286 55529215 c.2037 C>A p.C679X Stop-gain 0.009 34 1 129 76
17 exm62616 rs148612296 55517952 c.525 C>T p.D175D Synonymous 0.009 34 1 136 77
18 exm2252207 rs28385710 55518418 c.753C>T p.R251R Synonymous 0.0002 1 1 207 105
19 exm2252208 rs140364657 55527217 c. 1851 C>T p.A617A Synonymous 0.006 20 1 135 79

DBP, diastolic blood pressure; HWE, Hardy-Weinberg Equilibrium; MAF, minor allele frequency; SBP, systolic blood pressure.