Table 2.
Category | Heat-stress | Normal | ||
---|---|---|---|---|
Sequences | Unique sequences | Sequences | Unique sequences | |
Raw reads | 9668506 | 495021 | 13912941 | 545772 |
Low-quality reads removed | 11026 | 3040 | 13931 | 1656 |
3ADT and length filtera | 1202522 | 164358 | 581309 | 159157 |
mRNA, RFam, Repbase, matches removed | 5005388 | 72864 | 1704071 | 61936 |
Mappable sequencesb | 5278893 | 263210 | 11901654 | 303021 |
a3ADT and length filter: reads removed due to 3ADT
bMappable sequences: The raw reads were passed through a series of digital filters by Illumina’s Genome Analyzer Pipeline software and ACGT101-miR program, and the resulting sequences were called “mappable sequences”