Table 1. Characterization of Net toxins.
Protein 1 | Length (aa) | Molecular size (mature protein) in kDa | Predicted Product | E-Value | % of Identity 2 | Localization 3 | Conserved Domain | Accession | PSSM-ID | SignalP 4 |
---|---|---|---|---|---|---|---|---|---|---|
NetE | 322 | 36.1 (32.9) | Putative beta-pore-forming toxin | 3.14E-71 | 254/322 (79%) | Extracellular | Leukocidin/Hemolysin toxin family | cl08468 | 244969 | 30–31 |
NetF | 305 | 34.3 (31.7) | Putative beta-pore-forming toxin | 4.41E-57 | 143/299 (48%) | Extracellular | Leukocidin/Hemolysin toxin family | cl08468 | 244969 | 24–25 |
NetG | 306 | 34.3 (31.7) | Putative beta-pore-forming toxin | 2.89E-70 | 143/276 (52%) | Extracellular | Leukocidin/Hemolysin toxin family | cl08468 | 244969 | 24–25 |
1Based on strain JFP718 genome
2Percent amino acid identity with NetB (query length/total length of the subject protein)
3Subcellular location as predicted by pSortb
4Signal peptide was predicted by SignalP cleavage position