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. 2015 Feb 19;53(3):997–1001. doi: 10.1128/JCM.03072-14

TABLE 1.

Characteristics of the 75 selected strains belonging to 22 Nocardia speciesa

Nocardia sp. (no. of strains; no. of provinces) Clinical origin(s) Strain agreement between 16S and gyrB (no. of strains/total no. of strains)
Commonly reported group (40 isolates)
    N. brasiliensis (10; 8) 4 sputum, 2 cutaneous abscess, 4 wound 10/10
    N. carnea (10; 5) 7 sputum, 1 gastric juice, 1 BAL fluid,b 1 perianal exudate 3/10
    N. otitidiscaviarum (10; 8) 7 sputum, 2 pleural liquid, 1 BAL fluid 10/10
    N. transvalensis (10; 8) 6 sputum, 1 cornea, 1 wound, 1 BAL fluid, 1 cutaneous abscess 0/10
Unusually reported species (35 isolates)
    N. arthritidis (1; 1) 1 BAL fluid 1/1
    N. asteroides (2; 2) 2 sputum 1/2
    N. beijingensis (4; 3) 3 sputum, 1 BAL fluid 2/4
    N. elegans (1; 1) 1 sputum 0/1
    N. exalbida (1; 1) 1 pulmonary puncture 0/1
    N. flavorosea (1; 1) 1 sputum 0/1
    N. higoensis (1; 1) 1 sputum 0/1
    N. ignorata (4; 2) 2 sputum, 1 wound, 1 gastric juice 4/4
    N. jiangxiensis (1; 1) 1 sputum 0/1
    N. paucivorans (2; 2) 1 sputum, 1 BASc 2/2
    N. pneumoniae (1; 1) 1 BAS 1/1
    N. puris (2; 2) 2 sputum 2/2
    N. rhamnosiphila cluster (4; 3) 3 sputum, 1 BAS 1/4
    N. takedensis (3; 2) 3 sputum 3/3
    N. testacea (3; 1) 3 sputum 2/3
    N. veterana (1; 1) 1 sputum 1/1
    N. vinacea (1; 1) 1 nodule 1/1
    N. wallacei (2; 2) 2 sputum 0/2
a

Nocardia species were classified according to their full 16S sequences.

b

BAL, bronchoalveolar lavage.

c

BAS, bronchoaspirate.