Table 2. Upregulated candidate plasma biomarkers from analysis of WHI pre-diagnostic plasma antibody microarray interrogation.
Candidate up-regulated pre-diagnostic plasma biomarkers for human pancreas cancer. Antibody microarray interrogation and paired T test analyses were used to identify candidate plasma proteins differentiating pre-diagnostic pancreas cancer plasma from age-matched control samples with statistical significance. M values were normalized using linear regression to remove the systematic bias due to experimental or characteristic factors such as printing, incubation day and BMI. We then computed the paired T test p-value and the effect size (the mean difference of case and control in the scale of the control standard deviance). Candidates are listed basedon ascending p-values.
Gene name | Protein name | Effect size |
p-value |
---|---|---|---|
SEPT5 | septin 5 | 0.42 | 0.0083 |
IL2RA | interleukin 2 receptor, alpha | 0.42 | 0.0085 |
ERBB2 | v-erb-b2 erythroblastic leukemia viral oncogene homolog 2 | 0.59 | 0.0122 |
KRT16 | keratin 16 | 0.34 | 0.0129 |
ESR1 | estrogen receptor 1 | 0.63 | 0.0132 |
GATA3 | GATA binding protein 3 | 0.28 | 0.0181 |
TLX3 | T-cell leukemia homeobox 3 | 0.36 | 0.0190 |
CDK2AP1 | cyclin-dependent kinase 2 associated protein 1 | 0.38 | 0.0205 |
STAT3 (pY705) | signal transducer and activator of transcription 3 | 0.38 | 0.0224 |
CLU | clusterin | 0.37 | 0.0226 |
SERPINH1 | serpin peptidase inhibitor, clade H | 0.45 | 0.0227 |
HOXD13 | homeobox D13 | 0.33 | 0.0229 |
BCL2 | B-cell CLL/lymphoma 2 | 0.40 | 0.0276 |
IL1A | interleukin 1, alpha | 0.30 | 0.0326 |
MLLT10 | myeloid/lymphoid or mixed-lineage leukemia, 10 | 0.33 | 0.0346 |
DDB2 | damage-specific DNA binding protein 2, 48kDa | 0.26 | 0.0368 |
CD20 (MS4A1) | membrane-spanning 4-domains, subfamily A, member 1 | 0.21 | 0.0371 |
BRAF | v-raf murine sarcoma viral oncogene homolog B1 | 0.27 | 0.0379 |
TNC | tenascin C | 0.35 | 0.0402 |
STEAP2 | STEAP family member 2, metalloreductase | 0.29 | 0.0421 |
PKM2 | pyruvate kinase, muscle | 0.39 | 0.0478 |
NDRG1 | N-myc downstream regulated 1 | 0.45 | 0.0484 |
ESR1 | estrogen receptor 1 | 0.43 | 0.0498 |