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. 2012 Nov 11;2012:381023. doi: 10.5402/2012/381023

Table 1.

The mean correlation distance between each test sample and the core samples of the classical, mesenchymal, and proneural subtypes of GBM. The sample is predicted to belong to a subtype if its mean correlation distance to the core group is smaller than a predetermined value. The 10 assignments provided by our prediction model agree with the TCGA classification.

Patient
sample
Correlation distance
(Clas/Mes)
Correlation
distance
(Proneural)
Correlation
distance (Classical)
Correlation
distance
(Mesenchymal)
Prediction TCGA
Assignment
TCGA-02-0015 0.60 ± 0.18 1.46 ± 0.11 1.04 ± 0.23 0.72 ± 0.14
TCGA-02-0021 0.39 ± 0.25 1.78 ± 0.07 0.31 ± 0.13 1.61 ± 0.06 C C
TCGA-02-0026 1.62 ± 0.17 0.27 ± 0.12 P P
TCGA-02-0037 0.56 ± 0.15 1.52 ± 0.08 0.88 ± 0.21 1.03 ± 0.11
TCGA-02-0051 0.57 ± 0.27 1.39 ± 0.13 1.26 ± 0.14 0.28 ± 0.08 M M
TCGA-02-0058 1.49 ± 0.20 0.45 ± 0.17
TCGA-02-0074 1.58 ± 0.18 0.25 ± 0.13 P P
TCGA-02-0075 0.35 ± 0.19 1.74 ± 0.11 1.23 ± 0.14 0.36 ± 0.11 M M
TCGA-02-0106 0.38 ± 0.17 1.73 ± 0.08 0.91 ± 0.14 0.56 ± 0.12 M
TCGA-02-0451 0.73 ± 0.24 1.38 ± 0.13 N
TCGA-06-0168 1.19 ± 0.15 0.87 ± 0.11
TCGA-06-0171 1.48 ± 0.13 0.47 ± 0.08 N
TCGA-06-0185 0.84 ± 0.33 1.31 ± 0.17 N
TCGA-06-0190 0.49 ± 0.25 1.56 ± 0.16 1.54 ± 0.14 0.35 ± 0.10 M M
TCGA-06-0410 1.41 ± 0.28 0.41 ± 0.15 P P
TCGA-06-0413 1.67 ± 0.18 0.17 ± 0.08 P P
TCGA-08-0359 1.64 ± 0.14 0.25 ± 0.08 P P
TCGA-08-0380 1.09 ± 0.24 0.91 ± 0.19 N
TCGA-08-0517 1.50 ± 0.17 0.38 ± 0.11 P P
TCGA-08-0521 0.56 ± 0.25 1.47 ± 0.15 1.58 ± 0.09 0.38 ± 0.13