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. 2015 Apr 2;7(1):39. doi: 10.1186/s13148-015-0073-5

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© Ollikainen et al.; licensee BioMed Central. 2015

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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CGIs underrepresented and open seas overrepresented among the differentially methylated CpGs. Bar plot shows the proportions of the differentially methylated CpGs at CGIs, shores, shelves, and open sea and the P values denote which of the CpG categories are over- or underrepresented among the differentially methylated CpGs (n = 1,236) in the eLF group. Fisher’s exact test was used to generate P values for each group to see if they are under- or overrepresented among the 1,236 CpGs. Open sea, isolated CpGs outside any CGIs; shelves, 2 to 4 kb from CGI; CGI shores, <2 kb from CGI.