Table 3. GST M1-T1 null allele frequency based genetic distance between 45 geographically assorted human populations (GAHPs).
S. No. | GAHPs | eAf_Zim | sAf_Nam | Ind_Guj | sAf_Xho | Ind_Tn | Ind_Kar | Ind_Wb | mAf_Cam | Ind_Mah | wAf_Nig | Ind_Ker | Ind_Up | Ind_Ap | sAm_Brz |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | eAf_Zim | ||||||||||||||
2 | sAf_Nam | 0.019641 | |||||||||||||
3 | Ind_Guj | 0.008566 | 0.004982 | ||||||||||||
4 | sAf_Xho | 0.018002 | 0.007702 | 0.002144 | |||||||||||
5 | Ind_Tn | 0.003500 | 0.033450 | 0.022055 | 0.037140 | ||||||||||
6 | Ind_Kar | 0.003729 | 0.037771 | 0.023632 | 0.038408 | 0.000355 | |||||||||
7 | Ind_Wb | 0.012420 | 0.058122 | 0.041785 | 0.061245 | 0.003252 | 0.002526 | ||||||||
8 | mAf_Cam | 0.036741 | 0.028132 | 0.014999 | 0.006642 | 0.063507 | 0.062461 | 0.090338 | |||||||
9 | Ind_Mah | 0.013628 | 0.064129 | 0.044263 | 0.063067 | 0.004934 | 0.003307 | 0.000574 | 0.088816 | ||||||
10 | wAf_Nig | 0.011698 | 0.025018 | 0.007718 | 0.007576 | 0.026876 | 0.025085 | 0.042346 | 0.009135 | 0.040441 | |||||
11 | Ind_Ker | 0.018509 | 0.075817 | 0.052630 | 0.072183 | 0.008654 | 0.006243 | 0.002038 | 0.096709 | 0.000540 | 0.045207 | ||||
12 | Ind_Up | 0.011897 | 0.062884 | 0.039784 | 0.055683 | 0.006375 | 0.003826 | 0.003100 | 0.075196 | 0.001229 | 0.031146 | 0.001306 | |||
13 | Ind_Ap | 0.011155 | 0.056511 | 0.029903 | 0.039082 | 0.013492 | 0.009762 | 0.014788 | 0.047057 | 0.011066 | 0.014791 | 0.011238 | 0.005068 | ||
14 | sAm_Brz | 0.019686 | 0.071517 | 0.039623 | 0.047429 | 0.023229 | 0.018123 | 0.023228 | 0.050077 | 0.017729 | 0.017980 | 0.016579 | 0.009579 | 0.001318 | |
15 | eAf_Som | 0.047449 | 0.069856 | 0.039132 | 0.031371 | 0.071354 | 0.065680 | 0.087771 | 0.014241 | 0.080505 | 0.013198 | 0.082462 | 0.062745 | 0.031855 | 0.027019 |
16 | sAs_Iran | 0.033673 | 0.067958 | 0.035776 | 0.033278 | 0.050368 | 0.044624 | 0.060441 | 0.022080 | 0.053470 | 0.010096 | 0.054000 | 0.038840 | 0.015631 | 0.011558 |
17 | seAs_Vie | 0.027183 | 0.078906 | 0.043887 | 0.048612 | 0.034281 | 0.028238 | 0.035694 | 0.045118 | 0.028849 | 0.017602 | 0.027294 | 0.018065 | 0.004738 | 0.001318 |
18 | eAf_Eth | 0.041147 | 0.083845 | 0.047123 | 0.045069 | 0.056782 | 0.049923 | 0.064060 | 0.031565 | 0.055751 | 0.016495 | 0.054832 | 0.040296 | 0.016788 | 0.010910 |
19 | sAs_Pak | 0.037341 | 0.107807 | 0.067666 | 0.078333 | 0.036617 | 0.029669 | 0.029982 | 0.079443 | 0.022419 | 0.037756 | 0.018481 | 0.013929 | 0.007683 | 0.003628 |
20 | sAs_Afg | 0.044754 | 0.124665 | 0.082681 | 0.097123 | 0.039341 | 0.032172 | 0.028470 | 0.102102 | 0.020874 | 0.052050 | 0.015882 | 0.014104 | 0.012496 | 0.008620 |
21 | eAs_Mon | 0.041766 | 0.111479 | 0.069331 | 0.077606 | 0.043779 | 0.036213 | 0.038385 | 0.074231 | 0.029918 | 0.036336 | 0.025780 | 0.019540 | 0.009564 | 0.004097 |
22 | nEu_Fin | 0.056413 | 0.147166 | 0.103438 | 0.122646 | 0.045284 | 0.037978 | 0.029516 | 0.132931 | 0.022041 | 0.072547 | 0.015927 | 0.017497 | 0.021698 | 0.018273 |
23 | sEu_Ita | 0.061485 | 0.153594 | 0.106118 | 0.122436 | 0.053407 | 0.045069 | 0.038414 | 0.126364 | 0.029524 | 0.070064 | 0.022816 | 0.022503 | 0.022062 | 0.016456 |
24 | eEu_Rus | 0.059262 | 0.147482 | 0.099679 | 0.113354 | 0.054266 | 0.045694 | 0.041407 | 0.113525 | 0.032070 | 0.062336 | 0.025631 | 0.023486 | 0.019501 | 0.013120 |
25 | eAs_Jap | 0.110350 | 0.146520 | 0.099722 | 0.084594 | 0.142570 | 0.132315 | 0.158417 | 0.048140 | 0.144938 | 0.053266 | 0.143253 | 0.118214 | 0.072885 | 0.059379 |
26 | wEu_Ned | 0.059823 | 0.144141 | 0.095375 | 0.105798 | 0.058632 | 0.049635 | 0.048197 | 0.101024 | 0.038141 | 0.055834 | 0.031893 | 0.027464 | 0.018923 | 0.011362 |
27 | sEu_Spa | 0.060246 | 0.145849 | 0.097044 | 0.108186 | 0.058185 | 0.049224 | 0.047092 | 0.104342 | 0.037126 | 0.057711 | 0.030768 | 0.026857 | 0.019275 | 0.011877 |
28 | eEu_Pol | 0.065713 | 0.157598 | 0.107503 | 0.121115 | 0.060599 | 0.051493 | 0.046757 | 0.119726 | 0.036775 | 0.067624 | 0.029742 | 0.027621 | 0.023028 | 0.015739 |
29 | eEu_Slk | 0.067544 | 0.161727 | 0.111408 | 0.126171 | 0.061054 | 0.051968 | 0.046119 | 0.126173 | 0.036234 | 0.071687 | 0.028989 | 0.027678 | 0.024546 | 0.017452 |
30 | wEu_Ger | 0.070266 | 0.166596 | 0.115586 | 0.130954 | 0.063009 | 0.053801 | 0.047246 | 0.131318 | 0.037254 | 0.075319 | 0.029750 | 0.028878 | 0.026377 | 0.019164 |
31 | seAs_Phi | 0.070253 | 0.140613 | 0.090160 | 0.090823 | 0.080995 | 0.070962 | 0.078774 | 0.072213 | 0.066801 | 0.045336 | 0.061492 | 0.049833 | 0.027442 | 0.016743 |
32 | eEu_Bul | 0.072759 | 0.171473 | 0.120080 | 0.136502 | 0.064240 | 0.055011 | 0.047413 | 0.138030 | 0.037460 | 0.079764 | 0.029721 | 0.029583 | 0.028364 | 0.021260 |
33 | sEu_Sln | 0.066941 | 0.151257 | 0.099936 | 0.107876 | 0.068535 | 0.058783 | 0.059143 | 0.098202 | 0.048016 | 0.056728 | 0.041428 | 0.035289 | 0.022831 | 0.013657 |
34 | sEu_Gre | 0.084181 | 0.192766 | 0.140787 | 0.162602 | 0.069434 | 0.060400 | 0.047888 | 0.171015 | 0.038494 | 0.101709 | 0.029929 | 0.033419 | 0.038936 | 0.032905 |
35 | eAs_Kor | 0.131072 | 0.171461 | 0.120063 | 0.103009 | 0.165454 | 0.153899 | 0.180971 | 0.061388 | 0.165744 | 0.067925 | 0.162999 | 0.136593 | 0.087477 | 0.071632 |
36 | wAs_Cau | 0.114150 | 0.162684 | 0.110741 | 0.097673 | 0.142911 | 0.131528 | 0.153814 | 0.060689 | 0.139138 | 0.059434 | 0.135556 | 0.112713 | 0.069730 | 0.054782 |
37 | wEu_Fra | 0.079786 | 0.181720 | 0.127681 | 0.143431 | 0.071836 | 0.061962 | 0.054405 | 0.142357 | 0.043640 | 0.084247 | 0.035309 | 0.034781 | 0.032085 | 0.023807 |
38 | eAs_Chi | 0.107068 | 0.162350 | 0.109199 | 0.098764 | 0.132097 | 0.120617 | 0.139605 | 0.064352 | 0.125031 | 0.057523 | 0.120667 | 0.100165 | 0.060995 | 0.046306 |
39 | nEu_Dnk | 0.086463 | 0.194885 | 0.140372 | 0.159569 | 0.074495 | 0.064731 | 0.053988 | 0.162804 | 0.043567 | 0.097621 | 0.034687 | 0.036500 | 0.038115 | 0.030493 |
40 | nEu_Swd | 0.088823 | 0.197255 | 0.141108 | 0.158695 | 0.078575 | 0.068343 | 0.058687 | 0.158719 | 0.047608 | 0.096026 | 0.038515 | 0.039288 | 0.038475 | 0.029849 |
41 | nAf_Egt | 0.087395 | 0.174577 | 0.117293 | 0.121158 | 0.093461 | 0.082045 | 0.085005 | 0.102434 | 0.071600 | 0.066203 | 0.063981 | 0.055069 | 0.035784 | 0.023311 |
42 | seAs_Ids | 0.110068 | 0.176501 | 0.119385 | 0.111506 | 0.131239 | 0.118996 | 0.134139 | 0.077907 | 0.118852 | 0.064351 | 0.112960 | 0.094840 | 0.058800 | 0.043301 |
43 | eEu_Cze | 0.093352 | 0.195596 | 0.135981 | 0.146458 | 0.091159 | 0.079672 | 0.075757 | 0.134876 | 0.062724 | 0.084693 | 0.053635 | 0.049608 | 0.038780 | 0.027114 |
44 | nEu_Uk | 0.100862 | 0.209262 | 0.147632 | 0.159813 | 0.096473 | 0.084651 | 0.078719 | 0.149197 | 0.065400 | 0.094779 | 0.055589 | 0.052818 | 0.043805 | 0.031824 |
45 | seAs_S_M | 0.171196 | 0.272027 | 0.195663 | 0.189285 | 0.188418 | 0.171818 | 0.180613 | 0.146069 | 0.160261 | 0.120939 | 0.148990 | 0.133165 | 0.096023 | 0.074061 |
The values represented in the table were computed between the population affiliations by Nei’s (1972) standard genetic distance (DST) method and were used in phylogenetic tree of 45 geographically assorted human populations for GST M1-T1 null allele frequency (Fig. 2). Abbreviations used were same as those in Table 1.