Table 4. OTU richness, coverage and diversity richness index of the 16S rRNA gene obtained from metagenomic sequencing.
Sample ID | No. of raw sequences | No. of high quality sequences | No. of OTUs | Simpson | Chao1 | Shannon | Good’s coverage |
---|---|---|---|---|---|---|---|
DM3 | 18,545 | 14,978 | 436 | 0.13 | 467.23 | 3.02 | 0.99 |
DH3 | 9,001 | 7,310 | 346 | 0.05 | 406.43 | 3.64 | 0.98 |
DM4 | 21,094 | 17,153 | 461 | 0.29 | 497.52 | 2.60 | 0.99 |
DH4 | 18,915 | 16,272 | 413 | 0.10 | 457.03 | 3.03 | 0.99 |