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. 2015 Apr 13;10(4):e0122076. doi: 10.1371/journal.pone.0122076

Table 1. The list of strains and plasmids used in the study.

Strains/plasmids Description of the strains References
mc 2 155 High efficiency transformation strain of M. smegmatis. [19]
Δarr::kan M. smegmatis mc 2 155 where arr gene is disrupted with kan R cassette This study
ΔudgB::hyg M. smegmatis mc 2 155 where udgB gene is disrupted with hyg R cassette [20]
Δfpg::hyg M. smegmatis mc 2 155 where fpg gene is disrupted with hyg R cassette [21]
ΔudgB::hygΔarr::kan M. smegmatis mc 2 155 where udgB and arr genes are disrupted with hyg R and kan R cassettes, respectively This study
Δfpg::hygΔarr::kan M. smegmatis mc 2 155 where fpg and arr genes are disrupted using hyg R and kan R cassettes, respectively This study
E. coli TG1 E. coli K-12 supE thi-1Δ (lac-proAB) Δ (mcr-hsdSM) [22]
pJET 1.2 PCR product cloning vector for E. coli (AmpR) Thermo Scientific
pPR27 (GenR) A mycobacterial-E. coli shuttle vector with sacB selection marker, mycobacterial origin of replication being temperature sensitive and gentamycin resistance cassette [23]
pUC4K An E. coli multicopy plasmid with kanamycin resistance cassette [24]
pMV361(HygR) A vector with origin for replication in E. coli and an attachment site attP and integrase gene int for integration into L5 site in mycobacteria, and hsp60 promoter. [25]
pMV261(HygR) A multi-copy vector system with origins for replication in E. coli and mycobacteria (pAL500), and hsp60 promoter. [25]