Table 1. Variants segregating with HWSD phenotype.
Genomic Location | Variant Type | Effect | gDNA | cDNA | Protein |
---|---|---|---|---|---|
chr8:80111598 | 1 bp-insertion | Frameshift SERPINB11 | g.80111598_80111599insC or:g8883_8884insC | c.504_505insC | p.Thr169Hisfs*3 |
chr8:80259666 | SNV | Downstream; 1431bp from SERPINB2 and upstream; 2596 bp from SerpinB10 | g.80259666T>C | N/A | N/A |
chr8:80319671 | 12 bp-insertion | Upstream; 691bp from SerpinB8 | g.80319671_80319683insTGAAAAATAAAT | N/A | N/A |
chr8:80319673 | 4-bp deletion | Upstream; 677bp from SerpinB8 | g. 80319673del | N/A | N/A |
Four variants were unique to the 23 affected Connemara ponies and heterozygous in 27 obligate carriers.