Table 1.

Result of Agrobacterium and Arabidopsis genome resequencing using the two different DNA fragmentation methods

Species	Fragmentation method	Chromosome	Number of reads	Ratio of coverage (%)	Average coverage depth (time)
Agrobacterium	REPLI-g/MspJI	Circular	1,380,029	99.9	64.3
		Linear	1,219,389	99.9	77.8
	Physical shearing	Circular	546,292	99.8	27.4
		Linear	496,662	99.9	34.1
Arabidopsis	REPLI-g/MspJI	1	4,611,463	97.3	36.4
		2	4,759,134	98	57.7
		3	4,702,657	98.3	47.9
		4	3,088,231	98	39.9
		5	4,222,266	98	37.8
	Physical shearing	1	5,116,095	98.9	41.5
		2	6,143,569	99.5	75
		3	6,083,236	99.5	62.4
		4	3,776,130	99.5	49.3
		5	4,980,370	99.4	45.1

Ratio of coverage denotes the value for specific nucleotides located on each chromosome.