Table 1. Biographical data with sequence coverage and sub-lineages of historical M. tuberculosis genomes.
Name | Body # | Sex | Age at death (years) | Date of death | Source of sample | Reads per sample (millions) | Reads mapping to H37Rv (thousands) | Genome | % | Coverage | Sub-lineage20 |
---|---|---|---|---|---|---|---|---|---|---|---|
László Beniczky | 121 | M | ∼38 | 1764 | Rib | 48 | 182 | B121-1 | 82 | 5.2X | 4.7 |
B121-2 | 10 | 0.7X | 4.3 | ||||||||
B121-3 | 8 | 0.5X | 4.b | ||||||||
Terézia Hausmann | 68 | F | 28 | 1797 | Left lung | 26 | 11,425 | B68-1* | 57 | 332X | 4.1.2.1 |
B68-2† | 43 | 253X | 4.7 | ||||||||
Anna Schneller | 78 | F | 48 | 1795 | Rib | 17 | 116 | B78 | 5.3X | 4.7 | |
Anna Schőner | 28 | F | 55 | 1793 | Abdomen | 60 | 202 | B28-1* | 75 | 6.1X | 4.1.2.1 |
B28-2† | 25 | 2.1X | 4.7 | ||||||||
Gáspár Steitel | 25 | M | 58 | 1794 | Abdomen | 64 | 50 | B25 | 1.7X | 4.a | |
Erzsébet Virágh | 80 | F | 37 | 1805 | Thorax | 14 | 253 | B80 | 12.8X | 4.1.2.1 | |
Unknown | 23 | M | >18 | 1731–1838 | Abdomen | 42 | 182 | B23-1 | 93 | 5.9X | 4.8 |
B23-2 | 7 | 0.4X | 4.1.2.1 | ||||||||
Unknown | 92 | M | 20–39 | 1787 | Thorax | 20 | 4,236 | B92-1 | 96 | 187X | 4.8 |
B92-2 | 4 | 8.6X | 4.8 |
F, female; M, male.
%Indicates percentage of reads belonging to specific genotype of all reads that map to M. tuberculosis H37Rv from a mixed sample.
*Genotypes B28-1 and B68-1 are indistinguishable.
†Genotypes B28-2 and B68-2 are indistinguishable.